Tableau information
Concept source: d4mcua_ amino acid (a.a.) range (GLY68)(GLN145)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY68) (LEU81) H1
(THR88) (GLN99) H2
(SER103) (GLY115) H3
(GLY118) (SER127) H4
(SER127) (GLN145) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 158.0° H2
H3 -25.8° 134.1° H3
H4 111.4° -90.5° 130.5° H4
H5 117.4° -71.8° 109.6° -58.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4fdka_ : (ILE5) (PRO83) [view usage] : d.278.1.1 |Ligand-binding domain in the NO signalling and Golgi transport |Ligand-binding domain in the NO signalling and Golgi transport |H-NOX domain |Methyl-accepting chemotaxis protein |Thermoanaerobacter tengcongensis [TaxId: 119072]
d1svcp2 : (PHE151) (MET208) [view usage] : b.2.5.3 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |Rel/Dorsal transcription factors, DNA-binding domain |p50 subunit of NF-kappa B (NFKB), N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1j3ua_ : (ILE412) (HIS461) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |L-aspartate ammonia lyase |Bacillus sp., ym55-1 [TaxId: 1409]
d2vdca3 : (VAL237) (VAL323) [view usage] : d.153.1.1 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Class II glutamine amidotransferases |Alpha subunit of glutamate synthase, N-terminal domain |Azospirillum brasilense [TaxId: 192]
d1j0ta_ : (ASN13) (GLN77) [view usage] : a.163.1.1 |Crustacean CHH/MIH/GIH neurohormone |Crustacean CHH/MIH/GIH neurohormone |Crustacean CHH/MIH/GIH neurohormone |Mlt-inhibiting hormone (MIH) |Kuruma prawn (Marsupenaeus japonicus) [TaxId: 27405]
d2hdoa1 : (GLN18) (GLU82) [view usage] : c.108.1.6 |HAD-like |HAD-like |beta-Phosphoglucomutase-like |Phosphoglycolate phosphatase |Lactobacillus plantarum [TaxId: 1590]
d1bq7a_ : (GLY66) (GLU139) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |Disulfide-bond formation facilitator (DsbA) |Escherichia coli [TaxId: 562]
d1h19a3 : (VAL381) (SER450) [view usage] : d.92.1.13 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Zn aminopeptidase catalytic domain |Leukotriene A4 hydrolase catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d3qbpb_ : (LEU417) (LYS470) [view usage] : a.127.1.0 |L-aspartase-like |L-aspartase-like |automated matches |automated matches |Mycobacterium marinum [TaxId: 216594]
d1u55b_ : (GLY3) (TRP81) [view usage] : d.278.1.1 |Ligand-binding domain in the NO signalling and Golgi transport |Ligand-binding domain in the NO signalling and Golgi transport |H-NOX domain |Methyl-accepting chemotaxis protein |Thermoanaerobacter tengcongensis [TaxId: 119072]
d2go7c_ : (SER17) (VAL84) [view usage] : c.108.1.6 |HAD-like |HAD-like |beta-Phosphoglucomutase-like |Hypothetical protein SP2064 |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2wgvb_ : (PRO72) (GLY157) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |Class D beta-lactamase |Pseudomonas aeruginosa, OXA-10 [TaxId: 287]
d3c7ma_ : (TYR64) (TYR155) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1mpxa2 : (ASN219) (TYR277) [view usage] : c.69.1.21 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |PepX catalytic domain-like |Alpha-amino acid ester hydrolase |Xanthomonas citri [TaxId: 346]
d3l9ua_ : (TYR67) (LYS155) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Salmonella enterica [TaxId: 216597]
d3s6jf_ : (VAL122) (ILE191) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Pseudomonas syringae [TaxId: 323]
d3l9vc_ : (HIS66) (GLU136) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Salmonella enterica [TaxId: 216597]
d1mp1a_ : (LYS49) (GLU125) [view usage] : a.188.1.1 |PWI domain |PWI domain |PWI domain |Ser/Arg-related nuclear matrix protein srm160 |Human (Homo sapiens) [TaxId: 9606]
d3laha_ : (GLY3) (TRP81) [view usage] : d.278.1.1 |Ligand-binding domain in the NO signalling and Golgi transport |Ligand-binding domain in the NO signalling and Golgi transport |H-NOX domain |Methyl-accepting chemotaxis protein |Thermoanaerobacter tengcongensis [TaxId: 119072]
d1ofda3 : (THR232) (LEU322) [view usage] : d.153.1.1 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Class II glutamine amidotransferases |Alpha subunit of glutamate synthase, N-terminal domain |Synechocystis sp. [TaxId: 1143]
d4wa8a2 : (ARG221) (PRO288) [view usage] : a.60.7.0 |SAM domain-like |5' to 3' exonuclease, C-terminal subdomain |automated matches |automated matches |Methanopyrus kandleri [TaxId: 190192]
d3hd5c_ : (PRO94) (HIS169) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Bordetella parapertussis [TaxId: 519]
d2yvxa3 : (PRO321) (GLU448) [view usage] : f.57.1.1 |MgtE membrane domain-like |MgtE membrane domain-like |MgtE membrane domain-like |Mg2+ transporter MgtE |Thermus thermophilus [TaxId: 274]
d1yfea_ : (LEU406) (VAL460) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3iqba_ : (ILE5) (PRO83) [view usage] : d.278.1.1 |Ligand-binding domain in the NO signalling and Golgi transport |Ligand-binding domain in the NO signalling and Golgi transport |H-NOX domain |Methyl-accepting chemotaxis protein |Thermoanaerobacter tengcongensis [TaxId: 119072]
d2woea_ : (THR229) (GLY292) [view usage] : a.209.1.0 |ADP-ribosylglycohydrolase |ADP-ribosylglycohydrolase |automated matches |automated matches |Rhodospirillum rubrum [TaxId: 1085]
d3ocec_ : (LEU411) (PHE459) [view usage] : a.127.1.0 |L-aspartase-like |L-aspartase-like |automated matches |automated matches |Brucella melitensis [TaxId: 359391]
d2wgva_ : (PRO72) (GLY157) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |Class D beta-lactamase |Pseudomonas aeruginosa, OXA-10 [TaxId: 287]
d4djna_ : (GLY200) (ASN314) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3rpna_ : (SER98) (GLY179) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3r6vf_ : (SER405) (HIS461) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |L-aspartate ammonia lyase |Bacillus sp., ym55-1 [TaxId: 1409]
d1u56b_ : (THR4) (TRP81) [view usage] : d.278.1.1 |Ligand-binding domain in the NO signalling and Golgi transport |Ligand-binding domain in the NO signalling and Golgi transport |H-NOX domain |Methyl-accepting chemotaxis protein |Thermoanaerobacter tengcongensis [TaxId: 119072]
d3k1za_ : (LEU25) (GLN112) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3l9va_ : (HIS66) (GLU141) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Salmonella enterica [TaxId: 216597]
d2pv4a1 : (GLU68) (GLY143) [view usage] : a.286.1.1 |Sama2622-like |Sama2622-like |Sama2622-like |Uncharacterized protein Sama2622 |Shewanella amazonensis [TaxId: 60478]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.3, c.69, c.108, d.92, a.127, c.47, d.153, b.2, a.25, d.278, a.60, a.209, a.163, a.188, f.57, a.286