Protein Concepts Dictionary

Tableau information

Concept source:  d4nb6a_  amino acid (a.a.) range (LEU246)(TYR348)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU246)  (THR263) H1
	  (LEU268)  (GLN274) H2
	  (SER280)  (LYS290) H3
	  (SER291)  (LEU317) H4
	  (CYS324)  (TYR348) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
H2       50.7°   H2                          
H3       90.6° -114.3°   H3                   
H4      148.1° -145.1°  -97.2°   H4            
H5      -67.8°  -31.0° -145.2°  115.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4nb6b_ :   (LEU246)  (TYR348)   [view usage] : a.123.1.0 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3b0wa_ :   (SER266)  (TYR369)   [view usage] : a.123.1.0 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3b0wb_ :   (SER266)  (TYR369)   [view usage] : a.123.1.0 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4nb6a_ :   (LEU246)  (TYR348)   [view usage] : a.123.1.0 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3l0lb_ :   (SER266)  (LEU344)   [view usage] : a.123.1.0 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3l0ja_ :   (LEU267)  (LEU344)   [view usage] : a.123.1.0 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.123