Tableau information
Concept source: d2vjta_ amino acid (a.a.) range (LYS76)(GLN161)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS76) (VAL97) H1
(VAL101) (ILE107) H2
(ILE109) (GLN120) H3
(ILE123) (LEU141) H4
(GLY143) (GLN161) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 152.5° H2
H3 -174.1° 28.7° H3
H4 -57.2° 143.6° 125.4° H4
H5 121.7° -35.8° -56.2° 175.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2vjta_ : (LYS76) (GLN161) [view usage] : a.1.1.3 |Globin-like |Globin-like |Phycocyanin-like phycobilisome proteins |automated matches |Gloeobacter violaceus [TaxId: 33072]
d1buca2 : (THR6) (GLN103) [view usage] : e.6.1.1 |Acyl-CoA dehydrogenase NM domain-like |Acyl-CoA dehydrogenase NM domain-like |Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains |Butyryl-CoA dehydrogenase, NM domains |Megasphaera elsdenii [TaxId: 907]
d2af7h_ : (LEU53) (GLU119) [view usage] : a.152.1.2 |AhpD-like |AhpD-like |CMD-like |Gamma-carboxymuconolactone decarboxylase, CMD |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1sija1 : (HIS86) (GLY158) [view usage] : a.56.1.1 |CO dehydrogenase ISP C-domain like |CO dehydrogenase ISP C-domain like |CO dehydrogenase ISP C-domain like |Aldehyde oxidoreductase, domain 2 |Desulfovibrio gigas [TaxId: 879]
d1j7wb_ : (VAL67) (HIS143) [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]
d1paqa_ : (TYR581) (ASP666) [view usage] : a.118.1.14 |alpha-alpha superhelix |ARM repeat |MIF4G domain-like |Translation initiation factor eIF-2b epsilon |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2bk9a_ : (ALA56) (ILE146) [view usage] : a.1.1.0 |Globin-like |Globin-like |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d2h9dc_ : (ALA11) (ARG98) [view usage] : a.130.1.1 |Chorismate mutase II |Chorismate mutase II |Dimeric chorismate mutase |Salicylate biosynthesis protein PchB |Pseudomonas aeruginosa [TaxId: 287]
d2c7ja_ : (THR77) (SER162) [view usage] : a.1.1.3 |Globin-like |Globin-like |Phycocyanin-like phycobilisome proteins |automated matches |Mastigocladus laminosus [TaxId: 83541]
d2uuld_ : (THR75) (SER172) [view usage] : a.1.1.3 |Globin-like |Globin-like |Phycocyanin-like phycobilisome proteins |automated matches |Phormidium sp. [TaxId: 1199]
d1f99a_ : (THR77) (SER162) [view usage] : a.1.1.3 |Globin-like |Globin-like |Phycocyanin-like phycobilisome proteins |Phycocyanin alpha subunit |Red alga (Polysiphonia urceolata) [TaxId: 65404]
d2vjrb_ : (ASN76) (ILE171) [view usage] : a.1.1.3 |Globin-like |Globin-like |Phycocyanin-like phycobilisome proteins |automated matches |Gloeobacter violaceus [TaxId: 33072]
d4lmxb_ : (ASN76) (ALA177) [view usage] : a.1.1.3 |Globin-like |Globin-like |Phycocyanin-like phycobilisome proteins |automated matches |Hemiselmis andersenii [TaxId: 464988]
d1ezaa1 : (GLN35) (GLY143) [view usage] : a.60.10.1 |SAM domain-like |Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |Escherichia coli [TaxId: 562]
d2c0ua2 : (SER7) (CYS107) [view usage] : e.6.1.1 |Acyl-CoA dehydrogenase NM domain-like |Acyl-CoA dehydrogenase NM domain-like |Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains |Nitroalkane oxidase |Fungus (Fusarium oxysporum) [TaxId: 5507]
d2aa1b1 : (LEU71) (LYS143) [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Antarctic fish (Trematomus newnesi) [TaxId: 35730]
d1ug3b2 : (SER1476) (ASP1554) [view usage] : a.118.1.14 |alpha-alpha superhelix |ARM repeat |MIF4G domain-like |Eukaryotic initiation factor eIF4G |Human (Homo sapiens) [TaxId: 9606]
d1ug3a2 : (SER1476) (ASP1554) [view usage] : a.118.1.14 |alpha-alpha superhelix |ARM repeat |MIF4G domain-like |Eukaryotic initiation factor eIF4G |Human (Homo sapiens) [TaxId: 9606]
d2uumb_ : (THR75) (SER172) [view usage] : a.1.1.3 |Globin-like |Globin-like |Phycocyanin-like phycobilisome proteins |automated matches |Spirulina sp. [TaxId: 1157]
d2c7jb_ : (HIS75) (ALA172) [view usage] : a.1.1.3 |Globin-like |Globin-like |Phycocyanin-like phycobilisome proteins |automated matches |Mastigocladus laminosus [TaxId: 83541]
d4lm6d_ : (LYS78) (ALA177) [view usage] : a.1.1.3 |Globin-like |Globin-like |Phycocyanin-like phycobilisome proteins |automated matches |Hemiselmis virescens [TaxId: 77927]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.118, e.6, a.152, a.1, a.60, a.56, a.130