Protein Concepts Dictionary

Tableau information

Concept source:  d3eb7a1  amino acid (a.a.) range (LEU196)(MET290)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU196)  (ILE215) H1
	  (PHE216)  (GLY221) H2
	  (SER223)  (LYS257) H3
	  (ASN260)  (SER277) H4
	  (LEU279)  (MET290) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
H2      -53.7°   H2                          
H3     -162.4°  143.8°   H3                   
H4      -14.8°   42.3° -168.3°   H4            
H5       10.4°  -48.5° -166.4°   18.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1dlca3 :   (LEU194)  (VAL288)   [view usage] : f.1.3.1 |Toxins' membrane translocation domains |delta-Endotoxin (insectocide), N-terminal domain |delta-Endotoxin (insectocide), N-terminal domain |delta-Endotoxin (insectocide), N-terminal domain |Bacillus thuringiensis tenebrionis, CRYIIIA (BT13) [TaxId: 1444]
 d4gsnb2 :    (ASP89)  (ILE169)   [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |African malaria mosquito (Anopheles gambiae) [TaxId: 7165]
 d2x64a2 :    (SER84)  (VAL172)   [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Xylella fastidiosa [TaxId: 160492]
 d4arxd1 :   (LEU158)  (ASP251)   [view usage] : f.1.3.1 |Toxins' membrane translocation domains |delta-Endotoxin (insectocide), N-terminal domain |delta-Endotoxin (insectocide), N-terminal domain |automated matches |Bacillus thuringiensis [TaxId: 29339]
 d2imib2 :    (ASP89)  (ILE169)   [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |African malaria mosquito (Anopheles gambiae) [TaxId: 7165]
 d3eb7a1 :   (LEU196)  (MET290)   [view usage] : f.1.3.0 |Toxins' membrane translocation domains |delta-Endotoxin (insectocide), N-terminal domain |automated matches |automated matches |Bacillus thuringiensis [TaxId: 1428]
 d1w99a1 :   (LEU175)  (ASP268)   [view usage] : f.1.3.1 |Toxins' membrane translocation domains |delta-Endotoxin (insectocide), N-terminal domain |delta-Endotoxin (insectocide), N-terminal domain |delta-Endotoxin (insectocide), N-terminal domain |Bacillus thuringiensis, Cry4Ba [TaxId: 1428]
 d3nivc2 :    (PHE89)  (HIS180)   [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Legionella pneumophila [TaxId: 272624]
 d1ciya3 :   (LEU158)  (ASP251)   [view usage] : f.1.3.1 |Toxins' membrane translocation domains |delta-Endotoxin (insectocide), N-terminal domain |delta-Endotoxin (insectocide), N-terminal domain |delta-Endotoxin (insectocide), N-terminal domain |Bacillus thuringiensis, CRYIA (A) [TaxId: 1428]
 d2lmga_ :   (SER537)  (LEU610)   [view usage] : a.8.4.1 |immunoglobulin/albumin-binding domain-like |Heat shock protein 70kD (HSP70), C-terminal subdomain |Heat shock protein 70kD (HSP70), C-terminal subdomain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ji6a3 :   (LYS210)  (ILE289)   [view usage] : f.1.3.1 |Toxins' membrane translocation domains |delta-Endotoxin (insectocide), N-terminal domain |delta-Endotoxin (insectocide), N-terminal domain |delta-Endotoxin (insectocide), N-terminal domain |Bacillus thuringiensis, CRY3bb1 [TaxId: 1428]
 d4gsna2 :    (ASP89)  (ILE169)   [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |African malaria mosquito (Anopheles gambiae) [TaxId: 7165]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.45,     f.1,     a.8