Tableau information
Concept source: d3kkac_ amino acid (a.a.) range (THR907)(LYS965)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR907) (LYS916) H1
(TYR920) (GLY928) H2
(ALA931) (GLN937) H3
(ASN940) (ILE946) H4
(PRO951) (LYS965) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 151.6° H2
H3 -64.9° 87.4° H3
H4 -91.7° 106.2° 114.2° H4
H5 121.2° -61.8° -111.8° 131.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1g9xa_ : (GLN92) (MET169) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |MJ1267 |Methanococcus jannaschii [TaxId: 2190]
d1qcka_ : (LYS6) (LEU89) [view usage] : a.60.5.1 |SAM domain-like |Barrier-to-autointegration factor, BAF |Barrier-to-autointegration factor, BAF |Barrier-to-autointegration factor, BAF |Human (Homo sapiens) [TaxId: 9606]
d2p6ra2 : (LEU631) (SER686) [view usage] : a.289.1.2 |Sec63 N-terminal domain-like |Sec63 N-terminal domain-like |Achaeal helicase C-terminal domain |Hel308 helicase |Archaeoglobus fulgidus [TaxId: 2234]
d3fk2c_ : (PRO1334) (ILE1429) [view usage] : a.116.1.0 |GTPase activation domain, GAP |GTPase activation domain, GAP |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1fi3a_ : (GLY3) (VAL78) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Cytochrome c551 |Pseudomonas stutzeri [TaxId: 316]
d2bzfa_ : (SER4) (ALA87) [view usage] : a.60.5.1 |SAM domain-like |Barrier-to-autointegration factor, BAF |Barrier-to-autointegration factor, BAF |Barrier-to-autointegration factor, BAF |Human (Homo sapiens) [TaxId: 9606]
d1lb2b_ : (PRO256) (GLY311) [view usage] : a.60.3.1 |SAM domain-like |C-terminal domain of RNA polymerase alpha subunit |C-terminal domain of RNA polymerase alpha subunit |C-terminal domain of RNA polymerase alpha subunit |Escherichia coli [TaxId: 562]
d2ksoa_ : (THR14) (THR77) [view usage] : a.60.1.0 |SAM domain-like |SAM/Pointed domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1x40a1 : (ASP17) (MET78) [view usage] : a.60.1.2 |SAM domain-like |SAM/Pointed domain |SAM (sterile alpha motif) domain |Centaurin-delta 1 (Arap2) |Human (Homo sapiens) [TaxId: 9606]
d2aq0a_ : (PRO14) (HIS70) [view usage] : a.60.2.5 |SAM domain-like |RuvA domain 2-like |Hef domain-like |DNA repair endonuclease XPF |Human (Homo sapiens) [TaxId: 9606]
d3senc2 : (VAL84) (LEU141) [view usage] : a.60.1.0 |SAM domain-like |SAM/Pointed domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1szpa1 : (ILE83) (LEU139) [view usage] : a.60.4.1 |SAM domain-like |Rad51 N-terminal domain-like |DNA repair protein Rad51, N-terminal domain |DNA repair protein Rad51, N-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2qarb_ : (SER30) (ALA107) [view usage] : a.60.1.1 |SAM domain-like |SAM/Pointed domain |Pointed domain |Etv6 transcription factor pointed domain (Tel SAM) |Escherichia coli [TaxId: 562]
d2kiva1 : (THR3) (LEU62) [view usage] : a.60.1.0 |SAM domain-like |SAM/Pointed domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3kkad_ : (THR908) (VAL969) [view usage] : a.60.1.0 |SAM domain-like |SAM/Pointed domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2dkxa_ : (ASN31) (SER91) [view usage] : a.60.1.0 |SAM domain-like |SAM/Pointed domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2gdwa_ : (ASN13) (SER85) [view usage] : a.28.1.2 |Acyl carrier protein-like |ACP-like |Peptidyl carrier domain |Peptidyl carrier protein (PCP), thioester domain |Bacillus brevis [TaxId: 1393]
d2csda3 : (ARG351) (GLN409) [view usage] : a.60.2.4 |SAM domain-like |RuvA domain 2-like |Topoisomerase V repeat domain |Topoisomerase V |Methanopyrus kandleri [TaxId: 2320]
d1pk3a1 : (THR18) (LYS78) [view usage] : a.60.1.2 |SAM domain-like |SAM/Pointed domain |SAM (sterile alpha motif) domain |Polycomb protein Scm |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1pk1a1 : (VAL19) (LYS79) [view usage] : a.60.1.2 |SAM domain-like |SAM/Pointed domain |SAM (sterile alpha motif) domain |Polyhomeotic |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d2a1ja1 : (PRO837) (HIS891) [view usage] : a.60.2.5 |SAM domain-like |RuvA domain 2-like |Hef domain-like |DNA repair endonuclease XPF |Human (Homo sapiens) [TaxId: 9606]
d1v38a_ : (THR14) (LEU71) [view usage] : a.60.1.2 |SAM domain-like |SAM/Pointed domain |SAM (sterile alpha motif) domain |Sam-domain protein samsn-1 |Mouse (Mus musculus) [TaxId: 10090]
d3seia2 : (LEU79) (HIS146) [view usage] : a.60.1.0 |SAM domain-like |SAM/Pointed domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4aqja_ : (THR3) (GLY91) [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ci4b_ : (GLN5) (ALA87) [view usage] : a.60.5.1 |SAM domain-like |Barrier-to-autointegration factor, BAF |Barrier-to-autointegration factor, BAF |Barrier-to-autointegration factor, BAF |Human (Homo sapiens) [TaxId: 9606]
d3kkac_ : (THR907) (LYS965) [view usage] : a.60.1.0 |SAM domain-like |SAM/Pointed domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2csba3 : (LEU410) (LEU463) [view usage] : a.60.2.4 |SAM domain-like |RuvA domain 2-like |Topoisomerase V repeat domain |Topoisomerase V |Methanopyrus kandleri [TaxId: 2320]
d1ci4a_ : (SER4) (ALA87) [view usage] : a.60.5.1 |SAM domain-like |Barrier-to-autointegration factor, BAF |Barrier-to-autointegration factor, BAF |Barrier-to-autointegration factor, BAF |Human (Homo sapiens) [TaxId: 9606]
d3fk2a_ : (PRO1334) (ILE1429) [view usage] : a.116.1.0 |GTPase activation domain, GAP |GTPase activation domain, GAP |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1z3eb1 : (LYS245) (GLY307) [view usage] : a.60.3.1 |SAM domain-like |C-terminal domain of RNA polymerase alpha subunit |C-terminal domain of RNA polymerase alpha subunit |C-terminal domain of RNA polymerase alpha subunit |Bacillus subtilis [TaxId: 1423]
d3sena2 : (LEU82) (TYR149) [view usage] : a.60.1.0 |SAM domain-like |SAM/Pointed domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3n4mb_ : (PRO256) (GLY311) [view usage] : a.60.3.1 |SAM domain-like |C-terminal domain of RNA polymerase alpha subunit |C-terminal domain of RNA polymerase alpha subunit |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1x9xa_ : (LEU12) (GLN67) [view usage] : a.60.1.2 |SAM domain-like |SAM/Pointed domain |SAM (sterile alpha motif) domain |Serine/threonine-protein kinase ste11 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2y9ua_ : (SER548) (PHE610) [view usage] : a.60.1.2 |SAM domain-like |SAM/Pointed domain |SAM (sterile alpha motif) domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3senb2 : (LEU82) (TYR146) [view usage] : a.60.1.0 |SAM domain-like |SAM/Pointed domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2psra_ : (THR3) (GLY91) [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |Calcyclin (S100) |Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
d2qb1a_ : (SER30) (GLN91) [view usage] : a.60.1.1 |SAM domain-like |SAM/Pointed domain |Pointed domain |Etv6 transcription factor pointed domain (Tel SAM) |Escherichia coli [TaxId: 562]
d2csba1 : (ARG351) (GLN409) [view usage] : a.60.2.4 |SAM domain-like |RuvA domain 2-like |Topoisomerase V repeat domain |Topoisomerase V |Methanopyrus kandleri [TaxId: 2320]
d1rm6c1 : (SER86) (GLU157) [view usage] : a.56.1.1 |CO dehydrogenase ISP C-domain like |CO dehydrogenase ISP C-domain like |CO dehydrogenase ISP C-domain like |4-hydroxybenzoyl-CoA reductase gamma subunit HrcC, C-terminal domain |Thauera aromatica [TaxId: 59405]
d3n4mc_ : (PRO256) (GLY311) [view usage] : a.60.3.1 |SAM domain-like |C-terminal domain of RNA polymerase alpha subunit |C-terminal domain of RNA polymerase alpha subunit |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1dxsa_ : (SER6) (LEU62) [view usage] : a.60.1.2 |SAM domain-like |SAM/Pointed domain |SAM (sterile alpha motif) domain |C-terminal domain of p73 |Human (Homo sapiens) [TaxId: 9606]
d2kiva2 : (SER77) (GLY133) [view usage] : a.60.1.0 |SAM domain-like |SAM/Pointed domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4pznc_ : (THR920) (GLU982) [view usage] : a.60.1.2 |SAM domain-like |SAM/Pointed domain |SAM (sterile alpha motif) domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ke7a_ : (GLY817) (LEU874) [view usage] : a.60.1.0 |SAM domain-like |SAM/Pointed domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ahob1 : (THR86) (ARG175) [view usage] : a.60.14.1 |SAM domain-like |eIF2alpha middle domain-like |eIF2alpha middle domain-like |Eukaryotic initiation factor 2alpha, eIF2alpha, domain 2 |Sulfolobus solfataricus [TaxId: 2287]
d1cooa_ : (ASP250) (GLU329) [view usage] : a.60.3.1 |SAM domain-like |C-terminal domain of RNA polymerase alpha subunit |C-terminal domain of RNA polymerase alpha subunit |C-terminal domain of RNA polymerase alpha subunit |Escherichia coli [TaxId: 562]
d1lkyb_ : (SER30) (GLN91) [view usage] : a.60.1.1 |SAM domain-like |SAM/Pointed domain |Pointed domain |Etv6 transcription factor pointed domain (Tel SAM) |Human (Homo sapiens) [TaxId: 9606]
d1sv0c_ : (ARG109) (SER174) [view usage] : a.60.1.1 |SAM domain-like |SAM/Pointed domain |Pointed domain |Modulator of the activity of Ets (MAE, CG15085-PA) |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1lb2e_ : (PRO256) (GLY311) [view usage] : a.60.3.1 |SAM domain-like |C-terminal domain of RNA polymerase alpha subunit |C-terminal domain of RNA polymerase alpha subunit |C-terminal domain of RNA polymerase alpha subunit |Escherichia coli [TaxId: 562]
d1sgga_ : (THR12) (MET73) [view usage] : a.60.1.2 |SAM domain-like |SAM/Pointed domain |SAM (sterile alpha motif) domain |EphB2 receptor |Chicken (Gallus gallus) [TaxId: 9031]
d3kkae_ : (THR908) (GLN968) [view usage] : a.60.1.0 |SAM domain-like |SAM/Pointed domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1pk3b_ : (THR18) (ASN80) [view usage] : a.60.1.0 |SAM domain-like |SAM/Pointed domain |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d4is7a2 : (LEU96) (GLY158) [view usage] : a.60.1.0 |SAM domain-like |SAM/Pointed domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2e8na_ : (THR14) (THR77) [view usage] : a.60.1.0 |SAM domain-like |SAM/Pointed domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3send2 : (LEU82) (ALA144) [view usage] : a.60.1.0 |SAM domain-like |SAM/Pointed domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1doqa_ : (PRO255) (LYS309) [view usage] : a.60.3.1 |SAM domain-like |C-terminal domain of RNA polymerase alpha subunit |C-terminal domain of RNA polymerase alpha subunit |C-terminal domain of RNA polymerase alpha subunit |Thermus thermophilus [TaxId: 274]
d1sv0d_ : (THR108) (MET173) [view usage] : a.60.1.1 |SAM domain-like |SAM/Pointed domain |Pointed domain |Modulator of the activity of Ets (MAE, CG15085-PA) |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.37, a.39, a.3, a.116, a.60, a.28, a.56, a.289