Tableau information
Concept source: d1vg7a_ amino acid (a.a.) range (PHE230)(ASP287)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PHE230) (PRO240) H1
(GLN244) (ARG249) H2
(TRP251) (GLY262) H3
(ILE263) (SER283) H4
(SER283) (ASP287) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -122.4° H2
H3 84.8° -149.3° H3
H4 116.7° -113.9° 55.3° H4
H5 -121.0° 28.2° -127.7° 122.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2azla_ : (PHE230) (ASP287) [view usage] : a.128.1.1 |Terpenoid synthases |Terpenoid synthases |Isoprenyl diphosphate synthases |automated matches |Thermotoga maritima [TaxId: 2336]
d4kt0b_ : (LYS4) (TRP70) [view usage] : f.29.1.1 |Photosystem I subunits PsaA/PsaB |Photosystem I subunits PsaA/PsaB |Photosystem I subunits PsaA/PsaB |automated matches |Synechocystis sp. [TaxId: 1148]
d3eyza2 : (ILE657) (ASN726) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |DNA polymerase I (Klenow fragment) |Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId: 1422]
d1fpsa_ : (LEU284) (TYR363) [view usage] : a.128.1.1 |Terpenoid synthases |Terpenoid synthases |Isoprenyl diphosphate synthases |Farnesyl diphosphate synthase (geranyltranstransferase) |Chicken (Gallus gallus) [TaxId: 9031]
d1wl2a_ : (SER229) (ASP287) [view usage] : a.128.1.1 |Terpenoid synthases |Terpenoid synthases |Isoprenyl diphosphate synthases |automated matches |Thermotoga maritima [TaxId: 243274]
d1vg7a_ : (PHE230) (ASP287) [view usage] : a.128.1.1 |Terpenoid synthases |Terpenoid synthases |Isoprenyl diphosphate synthases |Octoprenyl-diphosphate synthase |Thermotoga maritima [TaxId: 2336]
d1ubxa_ : (SER282) (ILE362) [view usage] : a.128.1.1 |Terpenoid synthases |Terpenoid synthases |Isoprenyl diphosphate synthases |Farnesyl diphosphate synthase (geranyltranstransferase) |Chicken (Gallus gallus) [TaxId: 9031]
d2hbja2 : (SER327) (ARG399) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exosome complex exonuclease RRP6 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3v5wa1 : (SER111) (ASN183) [view usage] : a.91.1.0 |Regulator of G-protein signaling, RGS |Regulator of G-protein signaling, RGS |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4b8nc_ : (HIS48) (LEU86) [view usage] : d.120.1.0 |Cytochrome b5-like heme/steroid binding domain |Cytochrome b5-like heme/steroid binding domain |automated matches |automated matches |Ostreococcus tauri virus 2 [TaxId: 696472]
d4u8ha2 : (PRO452) (LEU509) [view usage] : a.99.1.1 |Cryptochrome/photolyase FAD-binding domain |Cryptochrome/photolyase FAD-binding domain |Cryptochrome/photolyase FAD-binding domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1fqia_ : (LYS352) (ALA417) [view usage] : a.91.1.1 |Regulator of G-protein signaling, RGS |Regulator of G-protein signaling, RGS |Regulator of G-protein signaling, RGS |RGS9, RGS domain |Cow (Bos taurus) [TaxId: 9913]
d1xrla_ : (SER133) (ARG201) [view usage] : c.69.1.7 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Proline iminopeptidase-like |Tricorn interacting factor F1 |Thermoplasma acidophilum [TaxId: 2303]
d1w7oa_ : (GLU43) (THR116) [view usage] : a.138.1.1 |Multiheme cytochromes |Multiheme cytochromes |Cytochrome c3-like |Cytochrome c3 |Desulfovibrio baculatus (Desulfomicrobium baculatus) [TaxId: 899]
d1vg3a_ : (PHE230) (ASP287) [view usage] : a.128.1.1 |Terpenoid synthases |Terpenoid synthases |Isoprenyl diphosphate synthases |Octoprenyl-diphosphate synthase |Thermotoga maritima [TaxId: 2336]
d1la3a_ : (TYR65) (LEU141) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Recoverin |Cow (Bos taurus) [TaxId: 9913]
d1ubva_ : (SER282) (ILE362) [view usage] : a.128.1.1 |Terpenoid synthases |Terpenoid synthases |Isoprenyl diphosphate synthases |Farnesyl diphosphate synthase (geranyltranstransferase) |Chicken (Gallus gallus) [TaxId: 9031]
d4v1ah_ : (SER162) (THR233) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, mitochondrial (54S or 39S subunit) |Pig (Sus scrofa) [TaxId: 9823]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.69, i.1, a.128, c.55, a.39, a.138, a.91, a.99, d.120, f.29