Tableau information
Concept source: d1jafa_ amino acid (a.a.) range (PRO5)(PHE126)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO5) (GLY32) H1
(ASP37) (PHE59) H2
(PRO73) (ALA79) H3
(ALA79) (THR102) H4
(ASP104) (PHE126) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -154.6° H2
H3 95.9° -72.6° H3
H4 41.5° -160.7° -100.4° H4
H5 -143.9° 24.1° 93.7° -164.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2yl3a_ : (PRO5) (TYR123) [view usage] : a.24.3.2 |Four-helical up-and-down bundle |Cytochromes |Cytochrome c'-like |automated matches |Achromobacter xylosoxidans [TaxId: 85698]
d2yl7a_ : (PRO5) (TYR123) [view usage] : a.24.3.2 |Four-helical up-and-down bundle |Cytochromes |Cytochrome c'-like |automated matches |Achromobacter xylosoxidans [TaxId: 85698]
d2yl1a_ : (PRO5) (ALA122) [view usage] : a.24.3.2 |Four-helical up-and-down bundle |Cytochromes |Cytochrome c'-like |automated matches |Achromobacter xylosoxidans [TaxId: 85698]
d2fefa1 : (ARG11) (GLY129) [view usage] : a.29.11.1 |Bromodomain-like |PA2201 N-terminal domain-like |PA2201 N-terminal domain-like |Hypothetical protein PA2201 |Pseudomonas aeruginosa [TaxId: 287]
d1r0da_ : (LEU779) (THR965) [view usage] : a.216.1.1 |I/LWEQ domain |I/LWEQ domain |I/LWEQ domain |Huntingtin interacting protein 12 |Human (Homo sapiens) [TaxId: 9606]
d2yl0a_ : (PRO5) (TYR123) [view usage] : a.24.3.2 |Four-helical up-and-down bundle |Cytochromes |Cytochrome c'-like |automated matches |Achromobacter xylosoxidans [TaxId: 85698]
d1jafa_ : (PRO5) (PHE126) [view usage] : a.24.3.2 |Four-helical up-and-down bundle |Cytochromes |Cytochrome c'-like |Cytochrome c' |Rhodocyclus gelatinosus [TaxId: 28068]
d1e83a_ : (PRO5) (ARG124) [view usage] : a.24.3.2 |Four-helical up-and-down bundle |Cytochromes |Cytochrome c'-like |Cytochrome c' |Alcaligenes sp. [TaxId: 512]
d1e85a_ : (PRO5) (ALA122) [view usage] : a.24.3.2 |Four-helical up-and-down bundle |Cytochromes |Cytochrome c'-like |Cytochrome c' |Alcaligenes sp. [TaxId: 512]
d2huma_ : (ASN81) (SER136) [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
d2xl6a_ : (MET26) (ALA122) [view usage] : a.24.3.2 |Four-helical up-and-down bundle |Cytochromes |Cytochrome c'-like |automated matches |Achromobacter xylosoxidans [TaxId: 85698]
d2xm0a_ : (GLU6) (ALA122) [view usage] : a.24.3.2 |Four-helical up-and-down bundle |Cytochromes |Cytochrome c'-like |automated matches |Achromobacter xylosoxidans [TaxId: 85698]
d3ztza_ : (PRO5) (TYR123) [view usage] : a.24.3.2 |Four-helical up-and-down bundle |Cytochromes |Cytochrome c'-like |automated matches |Achromobacter xylosoxidans [TaxId: 85698]
d2xlda_ : (GLU6) (TYR123) [view usage] : a.24.3.2 |Four-helical up-and-down bundle |Cytochromes |Cytochrome c'-like |automated matches |Achromobacter xylosoxidans [TaxId: 85698]
d2xloa_ : (MET26) (GLU124) [view usage] : a.24.3.2 |Four-helical up-and-down bundle |Cytochromes |Cytochrome c'-like |automated matches |Achromobacter xylosoxidans [TaxId: 85698]
d1cgoa_ : (PRO5) (TYR123) [view usage] : a.24.3.2 |Four-helical up-and-down bundle |Cytochromes |Cytochrome c'-like |Cytochrome c' |Alcaligenes sp. [TaxId: 512]
d2xlea_ : (MET26) (LYS124) [view usage] : a.24.3.2 |Four-helical up-and-down bundle |Cytochromes |Cytochrome c'-like |automated matches |Achromobacter xylosoxidans [TaxId: 85698]
d3d19a2 : (LEU147) (LEU274) [view usage] : a.29.13.1 |Bromodomain-like |Bacillus cereus metalloprotein-like |Bacillus cereus metalloprotein-like |Uncharacterized protein BCE_G9241_1042 |Bacillus cereus [TaxId: 1396]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.2, a.29, a.24, a.216