Tableau information
Concept source: d1tjub_ amino acid (a.a.) range (PRO21)(HIS110)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO21) (TYR32) H1
(LEU36) (GLY55) H2
(THR58) (GLY79) H3
(ASP89) (LEU101) H4
(ASP104) (HIS110) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 90.2° H2
H3 -85.8° -176.0° H3
H4 -76.2° -57.9° 120.9° H4
H5 90.4° 85.1° -94.8° 140.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4nz2a_ : (PHE100) (ILE182) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Mammalian cytochrome p450 2c9 |Human (Homo sapiens) [TaxId: 9606]
d1hy1b_ : (PRO19) (LEU107) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]
d1fupa_ : (ASN394) (TRP453) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Fumarase |Escherichia coli [TaxId: 562]
d2e9fd_ : (GLY13) (LEU104) [view usage] : a.127.1.0 |L-aspartase-like |L-aspartase-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d3okia_ : (THR250) (SER359) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ot3a_ : (ASP231) (ARG340) [view usage] : a.222.1.1 |VPS9 domain |VPS9 domain |VPS9 domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1mw5a_ : (GLU3) (GLU112) [view usage] : d.259.1.1 |Hypothetical protein HI1480 |Hypothetical protein HI1480 |Hypothetical protein HI1480 |Hypothetical protein HI1480 |Haemophilus influenzae [TaxId: 727]
d1hy1d_ : (PRO19) (HIS108) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]
d2e9fb_ : (PRO14) (THR106) [view usage] : a.127.1.0 |L-aspartase-like |L-aspartase-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d1fuoa_ : (ASN394) (TRP453) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Fumarase |Escherichia coli [TaxId: 562]
d1txua_ : (THR249) (ARG340) [view usage] : a.222.1.1 |VPS9 domain |VPS9 domain |VPS9 domain |Rab5 GDP/GTP exchange factor (Rabex-5) |Human (Homo sapiens), gamma isoform [TaxId: 9606]
d1tjud_ : (ASP20) (HIS110) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]
d1reqa1 : (ASN485) (GLY557) [view usage] : c.1.19.1 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |Methylmalonyl-CoA mutase, N-terminal (CoA-binding) domain |Methylmalonyl-CoA mutase alpha subunit, domain 1 |Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, a.104, a.127, a.123, a.222, d.259