Protein Concepts Dictionary

Tableau information

Concept source:  d1p8cf_  amino acid (a.a.) range (THR22)(GLU113)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (THR22)   (ARG37) H1
	   (VAL43)   (LEU57) H2
	   (ASP60)   (GLN72) H3
	   (SER76)   (VAL90) H4
	   (GLY92)  (GLU113) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
H2      120.8°   H2                          
H3      -41.0° -159.1°   H3                   
H4      119.7°  -37.5°  150.0°   H4            
H5      -72.9°  137.1°  -40.8°  167.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2af7e_ :    (PRO31)  (PHE117)   [view usage] : a.152.1.2 |AhpD-like |AhpD-like |CMD-like |Gamma-carboxymuconolactone decarboxylase, CMD |Methanobacterium thermoautotrophicum [TaxId: 145262]
 d1jbga_ :     (GLN4)  (LEU105)   [view usage] : a.6.1.3 |Putative DNA-binding domain |Putative DNA-binding domain |DNA-binding N-terminal domain of transcription activators |Multidrug transporter activator MtaN |Bacillus subtilis [TaxId: 1423]
 d3c1lb_ :    (ASP43)  (ASP114)   [view usage] : a.152.1.3 |AhpD-like |AhpD-like |Atu0492-like |automated matches |Mesorhizobium loti [TaxId: 266835]
 d2af7d_ :    (PRO31)  (PHE117)   [view usage] : a.152.1.2 |AhpD-like |AhpD-like |CMD-like |Gamma-carboxymuconolactone decarboxylase, CMD |Methanobacterium thermoautotrophicum [TaxId: 145262]
 d1vkeb_ :    (THR22)   (ILE96)   [view usage] : a.152.1.2 |AhpD-like |AhpD-like |CMD-like |Hypothetical protein TM1620 |Thermotoga maritima [TaxId: 2336]
 d1t5ja_ :   (ASP194)  (TYR268)   [view usage] : a.209.1.1 |ADP-ribosylglycohydrolase |ADP-ribosylglycohydrolase |ADP-ribosylglycohydrolase |Hypothetical protein MJ1187 |Methanococcus jannaschii [TaxId: 2190]
 d1p8cc_ :    (THR22)  (GLY116)   [view usage] : a.152.1.2 |AhpD-like |AhpD-like |CMD-like |Hypothetical protein TM1620 |Thermotoga maritima [TaxId: 2336]
 d1p8ca_ :    (THR22)  (GLY116)   [view usage] : a.152.1.2 |AhpD-like |AhpD-like |CMD-like |Hypothetical protein TM1620 |Thermotoga maritima [TaxId: 2336]
 d2af7b_ :    (PRO31)  (GLU119)   [view usage] : a.152.1.2 |AhpD-like |AhpD-like |CMD-like |Gamma-carboxymuconolactone decarboxylase, CMD |Methanobacterium thermoautotrophicum [TaxId: 145262]
 d2af7f_ :    (PRO31)  (GLU119)   [view usage] : a.152.1.2 |AhpD-like |AhpD-like |CMD-like |Gamma-carboxymuconolactone decarboxylase, CMD |Methanobacterium thermoautotrophicum [TaxId: 145262]
 d2af7a1 :    (ASP32)  (GLU119)   [view usage] : a.152.1.2 |AhpD-like |AhpD-like |CMD-like |Gamma-carboxymuconolactone decarboxylase, CMD |Methanobacterium thermoautotrophicum [TaxId: 145262]
 d1vked_ :    (LEU23)  (GLY116)   [view usage] : a.152.1.2 |AhpD-like |AhpD-like |CMD-like |Hypothetical protein TM1620 |Thermotoga maritima [TaxId: 2336]
 d1vkec_ :    (THR22)  (GLY116)   [view usage] : a.152.1.2 |AhpD-like |AhpD-like |CMD-like |Hypothetical protein TM1620 |Thermotoga maritima [TaxId: 2336]
 d1p8cf_ :    (THR22)  (GLU113)   [view usage] : a.152.1.2 |AhpD-like |AhpD-like |CMD-like |Hypothetical protein TM1620 |Thermotoga maritima [TaxId: 2336]
 d1p8cb_ :    (THR22)  (GLY116)   [view usage] : a.152.1.2 |AhpD-like |AhpD-like |CMD-like |Hypothetical protein TM1620 |Thermotoga maritima [TaxId: 2336]
 d1vkef_ :    (LEU23)  (ASN115)   [view usage] : a.152.1.2 |AhpD-like |AhpD-like |CMD-like |Hypothetical protein TM1620 |Thermotoga maritima [TaxId: 2336]
 d1p8cd_ :    (LEU23)  (GLY116)   [view usage] : a.152.1.2 |AhpD-like |AhpD-like |CMD-like |Hypothetical protein TM1620 |Thermotoga maritima [TaxId: 2336]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.152,   a.209,     a.6