Tableau information
Concept source: d3g0qa1 amino acid (a.a.) range (ALA10)(GLU84)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA10) (ARG25) H1
(ASP35) (LEU46) H2
(ARG50) (PHE65) H3
(THR67) (ASP73) H4
(GLU76) (GLU84) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 92.0° H2
H3 -70.0° 139.9° H3
H4 75.1° 56.7° 83.7° H4
H5 85.4° -56.7° 148.8° -109.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1ayxa_ : (SER57) (SER163) [view usage] : a.102.1.1 |alpha/alpha toroid |Six-hairpin glycosidases |Glucoamylase |Glucoamylase |Yeast (Saccharomycopsis fibuligera) [TaxId: 4944]
d4ghla_ : (HIS198) (THR272) [view usage] : d.388.1.1 |Filoviridae VP35-like |Filoviridae VP35-like |Filoviridae VP35 |Filoviridae VP35 |Lake Victoria marburgvirus [TaxId: 33728]
d1orpa_ : (THR3) (ALA67) [view usage] : a.96.1.1 |DNA-glycosylase |DNA-glycosylase |Endonuclease III |Endonuclease III |Escherichia coli [TaxId: 562]
d1f4sp_ : (GLY-1) (ASN61) [view usage] : g.38.1.1 |Zn2/Cys6 DNA-binding domain |Zn2/Cys6 DNA-binding domain |Zn2/Cys6 DNA-binding domain |Ethanol regulon transcriptional activator ALCR DNA-binding domain |Emericella nidulans, also known as Aspergillus nidulans [TaxId: 162425]
d1od2b2 : (SER2101) (GLY2188) [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Acetyl-coenzyme A carboxylase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1rhza_ : (ILE5) (GLY92) [view usage] : f.41.1.1 |Preprotein translocase SecY subunit |Preprotein translocase SecY subunit |Preprotein translocase SecY subunit |Preprotein translocase SecY subunit |Methanococcus jannaschii [TaxId: 2190]
d1keaa_ : (ASP3) (THR73) [view usage] : a.96.1.2 |DNA-glycosylase |DNA-glycosylase |Mismatch glycosylase |Thymine-DNA glycosylase |Methanobacterium thermoformicicum [TaxId: 145262]
d1od2a2 : (ARG2099) (LYS2201) [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Acetyl-coenzyme A carboxylase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1rrsa1 : (PRO9) (GLU84) [view usage] : a.96.1.2 |DNA-glycosylase |DNA-glycosylase |Mismatch glycosylase |Catalytic domain of MutY |Bacillus stearothermophilus [TaxId: 1422]
d3usyb_ : (LEU195) (MET245) [view usage] : a.118.14.0 |alpha-alpha superhelix |FliG |automated matches |automated matches |Helicobacter pylori [TaxId: 210]
d2c35a1 : (PRO23) (ASN102) [view usage] : a.60.8.2 |SAM domain-like |HRDC-like |RNA polymerase II subunit RBP4 (RpoF) |RNA polymerase II subunit RBP4 (RpoF) |Human (Homo sapiens) [TaxId: 9606]
d1ad6a_ : (GLN383) (ARG467) [view usage] : a.74.1.3 |Cyclin-like |Cyclin-like |Retinoblastoma tumor suppressor domains |Retinoblastoma tumor suppressor domains |Human (Homo sapiens) [TaxId: 9606]
d2yb0a_ : (ARG153) (GLN243) [view usage] : a.204.1.0 |all-alpha NTP pyrophosphatases |all-alpha NTP pyrophosphatases |automated matches |automated matches |Leishmania major [TaxId: 5664]
d1m74a3 : (GLY3) (ARG75) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Translocation ATPase SecA, nucleotide-binding domains |Bacillus subtilis [TaxId: 1423]
d1p59a_ : (THR3) (ILE77) [view usage] : a.96.1.1 |DNA-glycosylase |DNA-glycosylase |Endonuclease III |Endonuclease III |Escherichia coli [TaxId: 562]
d3g0qa1 : (ALA10) (GLU84) [view usage] : a.96.1.2 |DNA-glycosylase |DNA-glycosylase |Mismatch glycosylase |Catalytic domain of MutY |Bacillus stearothermophilus [TaxId: 1422]
d1orna_ : (THR3) (ILE77) [view usage] : a.96.1.1 |DNA-glycosylase |DNA-glycosylase |Endonuclease III |Endonuclease III |Escherichia coli [TaxId: 562]
d1rrqa1 : (ALA10) (GLU84) [view usage] : a.96.1.2 |DNA-glycosylase |DNA-glycosylase |Mismatch glycosylase |Catalytic domain of MutY |Bacillus stearothermophilus [TaxId: 1422]
d2c3ea_ : (GLY155) (ARG258) [view usage] : f.42.1.1 |Mitochondrial carrier |Mitochondrial carrier |Mitochondrial carrier |automated matches |Cow (Bos taurus) [TaxId: 9913]
d4wz8c2 : (SER2100) (GLY2188) [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d1r42a_ : (THR414) (ASP509) [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |Angiotensin converting enzyme 2, ACE2 |Human (Homo sapiens) [TaxId: 9606]
d3j38n_ : (ARG19) (GLY79) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Drosophila melanogaster [TaxId: 7227]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
i.1, a.118, a.102, d.92, c.14, c.37, a.96, a.74, a.60, d.388, a.204, g.38, f.41, f.42