Tableau information
Concept source: d2id6a1 amino acid (a.a.) range (SER3)(ARG74)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER3) (VAL15) H1
(GLY20) (ALA24) H2
(THR26) (GLY34) H3
(GLY38) (TYR43) H4
(LYS47) (ARG74) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 124.3° H2
H3 122.7° 78.2° H3
H4 -106.9° -121.2° 98.4° H4
H5 -91.5° 138.8° 64.2° 53.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1i17a_ : (ALA23) (LYS96) [view usage] : d.6.1.1 |Prion-like |Prion-like |Prion-like |Prion-like protein Doppel |Mouse (Mus musculus) [TaxId: 10090]
d4m3ba1 : (ARG25) (GLU92) [view usage] : a.4.1.9 |DNA/RNA-binding 3-helical bundle |Homeodomain-like |Tetracyclin repressor-like, N-terminal domain |Ethr repressor |Mycobacterium tuberculosis [TaxId: 1773]
d3locc1 : (SER12) (TRP76) [view usage] : a.4.1.9 |DNA/RNA-binding 3-helical bundle |Homeodomain-like |Tetracyclin repressor-like, N-terminal domain |Hypothetical transcriptional regulator YcdC |Escherichia coli [TaxId: 562]
d3whba1 : (PRO6) (ALA77) [view usage] : a.4.1.0 |DNA/RNA-binding 3-helical bundle |Homeodomain-like |automated matches |automated matches |Bacillus subtilis [TaxId: 224308]
d2np5a1 : (PRO11) (GLU74) [view usage] : a.4.1.9 |DNA/RNA-binding 3-helical bundle |Homeodomain-like |Tetracyclin repressor-like, N-terminal domain |Transcriptional regulator RHA1_ro04179 |Rhodococcus sp. [TaxId: 1831]
d3pm1b1 : (MET1) (ALA72) [view usage] : a.4.1.9 |DNA/RNA-binding 3-helical bundle |Homeodomain-like |Tetracyclin repressor-like, N-terminal domain |Multidrug binding protein QacR |Staphylococcus aureus [TaxId: 1280]
d3bt9a1 : (LEU3) (ALA72) [view usage] : a.4.1.9 |DNA/RNA-binding 3-helical bundle |Homeodomain-like |Tetracyclin repressor-like, N-terminal domain |Multidrug binding protein QacR |Staphylococcus aureus [TaxId: 1280]
d3loca1 : (SER12) (TRP76) [view usage] : a.4.1.9 |DNA/RNA-binding 3-helical bundle |Homeodomain-like |Tetracyclin repressor-like, N-terminal domain |Hypothetical transcriptional regulator YcdC |Escherichia coli [TaxId: 562]
d3ih2a1 : (SER3) (ARG74) [view usage] : a.4.1.9 |DNA/RNA-binding 3-helical bundle |Homeodomain-like |Tetracyclin repressor-like, N-terminal domain |Transcriptional regulator TM1030 |Thermotoga maritima [TaxId: 2336]
d2d6yb1 : (ALA8) (PRO72) [view usage] : a.4.1.9 |DNA/RNA-binding 3-helical bundle |Homeodomain-like |Tetracyclin repressor-like, N-terminal domain |Putative regulator SCO4008 |Streptomyces coelicolor [TaxId: 1902]
d2zhxe_ : (PRO5) (PRO56) [view usage] : c.18.1.0 |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d2hyja1 : (LEU18) (ARG74) [view usage] : a.4.1.9 |DNA/RNA-binding 3-helical bundle |Homeodomain-like |Tetracyclin repressor-like, N-terminal domain |Putative transcriptional regulator SCO4940 |Streptomyces coelicolor [TaxId: 1902]
d3btia1 : (LEU3) (ALA72) [view usage] : a.4.1.9 |DNA/RNA-binding 3-helical bundle |Homeodomain-like |Tetracyclin repressor-like, N-terminal domain |Multidrug binding protein QacR |Staphylococcus aureus [TaxId: 1280]
d2np5c1 : (SER10) (VAL75) [view usage] : a.4.1.9 |DNA/RNA-binding 3-helical bundle |Homeodomain-like |Tetracyclin repressor-like, N-terminal domain |Transcriptional regulator RHA1_ro04179 |Rhodococcus sp. [TaxId: 1831]
d2id6a1 : (SER3) (ARG74) [view usage] : a.4.1.9 |DNA/RNA-binding 3-helical bundle |Homeodomain-like |Tetracyclin repressor-like, N-terminal domain |Transcriptional regulator TM1030 |Thermotoga maritima [TaxId: 2336]
d2fd5a1 : (ASP3) (GLU72) [view usage] : a.4.1.9 |DNA/RNA-binding 3-helical bundle |Homeodomain-like |Tetracyclin repressor-like, N-terminal domain |Probable transcriptional regulator PA3133 |Pseudomonas aeruginosa [TaxId: 287]
d1zkga1 : (SER3) (LYS72) [view usage] : a.4.1.9 |DNA/RNA-binding 3-helical bundle |Homeodomain-like |Tetracyclin repressor-like, N-terminal domain |Transcriptional regulator TM1030 |Thermotoga maritima [TaxId: 2336]
d1zk8a1 : (THR9) (GLU76) [view usage] : a.4.1.9 |DNA/RNA-binding 3-helical bundle |Homeodomain-like |Tetracyclin repressor-like, N-terminal domain |Transcriptional regulator BC5000 |Bacillus cereus [TaxId: 1396]
d4jykb1 : (ALA18) (TRP77) [view usage] : a.4.1.9 |DNA/RNA-binding 3-helical bundle |Homeodomain-like |Tetracyclin repressor-like, N-terminal domain |Hypothetical transcriptional regulator YcdC |Escherichia coli [TaxId: 562]
d4i76a1 : (LYS4) (ARG74) [view usage] : a.4.1.9 |DNA/RNA-binding 3-helical bundle |Homeodomain-like |Tetracyclin repressor-like, N-terminal domain |Transcriptional regulator TM1030 |Thermotoga maritima [TaxId: 2336]
d3whca1 : (ARG5) (ALA77) [view usage] : a.4.1.0 |DNA/RNA-binding 3-helical bundle |Homeodomain-like |automated matches |automated matches |Bacillus subtilis [TaxId: 224308]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.18, a.4, d.6