Tableau information
Concept source: d1e2rb1 amino acid (a.a.) range (SER50)(LEU129)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER50) (GLU63) H1
(THR82) (GLY90) H2
(PHE91) (ALA101) H3
(ASN108) (GLY113) H4
(SER116) (LEU129) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 108.0° H2
H3 45.3° 95.4° H3
H4 102.4° -66.2° -57.9° H4
H5 -92.7° -120.9° 133.3° 160.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1t09a_ : (VAL312) (LYS413) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |NADP-dependent isocitrate dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
d2zong_ : (ALA11) (ARG87) [view usage] : a.3.1.0 |Cytochrome c |Cytochrome c |automated matches |automated matches |Achromobacter xylosoxidans [TaxId: 85698]
d2qfwc_ : (VAL314) (SER411) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1ku2a2 : (PRO95) (THR218) [view usage] : a.177.1.1 |Sigma2 domain of RNA polymerase sigma factors |Sigma2 domain of RNA polymerase sigma factors |Sigma2 domain of RNA polymerase sigma factors |Sigma factor SigA |Thermus aquaticus [TaxId: 271]
d1zora_ : (ARG307) (LEU399) [view usage] : c.77.1.0 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d2ee4a_ : (PRO16) (LEU94) [view usage] : a.116.1.0 |GTPase activation domain, GAP |GTPase activation domain, GAP |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1gksa_ : (ASP1) (SER76) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Cytochrome c551 |Methylophilus methylotrophus, strain w3a1 [TaxId: 17]
d2uxqc_ : (VAL308) (LEU400) [view usage] : c.77.1.0 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |automated matches |automated matches |Desulfotalea psychrophila [TaxId: 84980]
d1h9yb1 : (PHE62) (LEU129) [view usage] : a.3.1.2 |Cytochrome c |Cytochrome c |N-terminal (heme c) domain of cytochrome cd1-nitrite reductase |N-terminal (heme c) domain of cytochrome cd1-nitrite reductase |Paracoccus pantotrophus [TaxId: 82367]
d4fzab_ : (LYS175) (ASN234) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4kmga_ : (GLY4) (ALA84) [view usage] : a.3.1.0 |Cytochrome c |Cytochrome c |automated matches |automated matches |Synechococcus sp. [TaxId: 84588]
d3inma_ : (VAL312) (ALA410) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4hrrb_ : (ARG2) (LEU86) [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin I |Ark clam (Scapharca inaequivalvis) [TaxId: 6561]
d4jibd_ : (THR583) (ASN627) [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1e2rb1 : (SER50) (LEU129) [view usage] : a.3.1.2 |Cytochrome c |Cytochrome c |N-terminal (heme c) domain of cytochrome cd1-nitrite reductase |N-terminal (heme c) domain of cytochrome cd1-nitrite reductase |Paracoccus denitrificans [TaxId: 266]
d3egwc_ : (GLN2) (ALA148) [view usage] : f.21.3.1 |Heme-binding four-helical bundle |Respiratory nitrate reductase 1 gamma chain |Respiratory nitrate reductase 1 gamma chain |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1gjqa1 : (SER32) (HIS111) [view usage] : a.3.1.2 |Cytochrome c |Cytochrome c |N-terminal (heme c) domain of cytochrome cd1-nitrite reductase |N-terminal (heme c) domain of cytochrome cd1-nitrite reductase |Pseudomonas aeruginosa [TaxId: 287]
d1dy7b1 : (SER50) (LEU129) [view usage] : a.3.1.2 |Cytochrome c |Cytochrome c |N-terminal (heme c) domain of cytochrome cd1-nitrite reductase |N-terminal (heme c) domain of cytochrome cd1-nitrite reductase |Paracoccus pantotrophus [TaxId: 82367]
d1hzua1 : (GLU33) (HIS111) [view usage] : a.3.1.2 |Cytochrome c |Cytochrome c |N-terminal (heme c) domain of cytochrome cd1-nitrite reductase |N-terminal (heme c) domain of cytochrome cd1-nitrite reductase |Pseudomonas aeruginosa [TaxId: 287]
d1h9xa1 : (SER50) (LEU129) [view usage] : a.3.1.2 |Cytochrome c |Cytochrome c |N-terminal (heme c) domain of cytochrome cd1-nitrite reductase |N-terminal (heme c) domain of cytochrome cd1-nitrite reductase |Paracoccus pantotrophus [TaxId: 82367]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.77, a.211, d.144, f.21, a.1, a.3, a.116, a.177