Tableau information
Concept source: d1k5ha1 amino acid (a.a.) range (LEU318)(SER398)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU318) (GLY328) H1
(THR332) (GLN349) H2
(ARG352) (ILE356) H3
(ILE356) (MET367) H4
(CYS374) (SER398) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 152.2° H2
H3 -31.0° -168.3° H3
H4 15.4° 144.9° -42.4° H4
H5 139.9° -35.4° 155.8° 124.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1e5wa1 : (GLN95) (ARG180) [view usage] : a.11.2.1 |Acyl-CoA binding protein-like |Second domain of FERM |Second domain of FERM |Moesin |Human (Homo sapiens) [TaxId: 9606]
d1adua1 : (ALA180) (ALA256) [view usage] : a.54.1.1 |Domain of early E2A DNA-binding protein, ADDBP |Domain of early E2A DNA-binding protein, ADDBP |Domain of early E2A DNA-binding protein, ADDBP |Domain of early E2A DNA-binding protein, ADDBP |Human adenovirus type 5 [TaxId: 28285]
d1h21a_ : (ASP25) (LEU98) [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |Dimeric di-heme split-soret cytochrome c |Desulfovibrio desulfuricans, ATCC 27774 [TaxId: 876]
d1vz0a1 : (GLU163) (GLU207) [view usage] : a.4.14.1 |DNA/RNA-binding 3-helical bundle |KorB DNA-binding domain-like |KorB DNA-binding domain-like |Putative partitioning protein ParB/Spo0J |Thermus thermophilus [TaxId: 274]
d1mmob_ : (ASN275) (ALA386) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Methane monooxygenase hydrolase beta subunit |Methylococcus capsulatus [TaxId: 414]
d2pfxa1 : (VAL47) (VAL110) [view usage] : a.152.1.3 |AhpD-like |AhpD-like |Atu0492-like |Uncharacterized protein TM1040_2465 |Silicibacter sp. tm1040 [TaxId: 292414]
d4eqya_ : (GLU197) (SER257) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
d1fpsa_ : (CYS72) (ILE190) [view usage] : a.128.1.1 |Terpenoid synthases |Terpenoid synthases |Isoprenyl diphosphate synthases |Farnesyl diphosphate synthase (geranyltranstransferase) |Chicken (Gallus gallus) [TaxId: 9031]
d1o1ra_ : (LEU302) (LYS366) [view usage] : a.118.6.1 |alpha-alpha superhelix |Protein prenylyltransferase |Protein prenylyltransferase |Protein farnesyltransferase alpha-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1jvsa1 : (CYS316) (SER397) [view usage] : a.69.3.1 |Left-handed superhelix |1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |Escherichia coli [TaxId: 562]
d2ns1a_ : (LEU198) (ARG307) [view usage] : f.44.1.0 |Ammonium transporter |Ammonium transporter |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1t1ra1 : (CYS316) (ALA396) [view usage] : a.69.3.1 |Left-handed superhelix |1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |Escherichia coli [TaxId: 562]
d2jf2a_ : (ILE199) (ARG255) [view usage] : b.81.1.1 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |UDP N-acetylglucosamine acyltransferase |UDP N-acetylglucosamine acyltransferase |Escherichia coli, gene lpxA [TaxId: 562]
d2prrc_ : (ARG47) (VAL112) [view usage] : a.152.1.3 |AhpD-like |AhpD-like |Atu0492-like |Uncharacterized protein Reut_A2532 |Ralstonia eutropha [TaxId: 106590]
d4i0ub1 : (ASP148) (ASN285) [view usage] : d.328.1.1 |CorA soluble domain-like |CorA soluble domain-like |CorA soluble domain-like |automated matches |Thermotoga maritima [TaxId: 243274]
d1u77a_ : (ASP6) (VAL134) [view usage] : f.44.1.1 |Ammonium transporter |Ammonium transporter |Ammonium transporter |Ammonium transporter AmtB |Escherichia coli [TaxId: 562]
d2egha1 : (PRO315) (LEU395) [view usage] : a.69.3.1 |Left-handed superhelix |1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |Escherichia coli [TaxId: 562]
d1r71a_ : (GLU196) (LEU250) [view usage] : a.4.14.1 |DNA/RNA-binding 3-helical bundle |KorB DNA-binding domain-like |KorB DNA-binding domain-like |Transcriptional repressor protein KorB DNA-binding domain |Escherichia coli [TaxId: 562]
d1k5ha1 : (LEU318) (SER398) [view usage] : a.69.3.1 |Left-handed superhelix |1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |Escherichia coli [TaxId: 562]
d3gzna_ : (ASN415) (TYR492) [view usage] : c.111.1.2 |Activating enzymes of the ubiquitin-like proteins |Activating enzymes of the ubiquitin-like proteins |Ubiquitin activating enzymes (UBA) |Amyloid beta precursor protein-binding protein 1, APPBP1 |Human (Homo sapiens) [TaxId: 9606]
d4nz0a_ : (ASN396) (TRP460) [view usage] : e.8.1.0 |DNA/RNA polymerases |DNA/RNA polymerases |automated matches |automated matches |Mengo virus [TaxId: 12107]
d1zrla1 : (ILE46) (PHE147) [view usage] : a.264.1.1 |Duffy binding domain-like |Duffy binding domain-like |Duffy binding domain |Erythrocyte binding antigen region II |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d2nuua_ : (ASP6) (VAL134) [view usage] : f.44.1.0 |Ammonium transporter |Ammonium transporter |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1q0ha1 : (CYS317) (ALA397) [view usage] : a.69.3.1 |Left-handed superhelix |1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, b.81, a.118, a.128, a.25, d.328, c.111, a.152, a.4, a.138, a.11, f.44, a.69, a.54, a.264