Tableau information
Concept source: d3omnc_ amino acid (a.a.) range (TYR422)(ASN532)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(TYR422) (PHE438) H1
(TRP451) (GLY478) H2
(PRO487) (TRP493) H3
(TRP493) (ARG521) H4
(ALA527) (ASN532) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 170.4° H2
H3 -26.9° 156.2° H3
H4 14.8° -156.1° 39.3° H4
H5 131.5° -54.1° 104.6° 142.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1nr5a_ : (ILE273) (ALA353) [view usage] : e.22.1.1 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Dehydroquinate synthase, DHQS |Dehydroquinate synthase, DHQS |Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]
d3omia_ : (HIS421) (ASN532) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |automated matches |Rhodobacter sphaeroides [TaxId: 272943]
d3fyec_ : (TYR414) (ASN532) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial aa3 type cytochrome c oxidase subunit I |Rhodobacter sphaeroides [TaxId: 1063]
d1foec1 : (SER1036) (LYS1122) [view usage] : a.87.1.1 |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |GEF of TIAM1 (T-Lymphoma invasion and metastasis inducing protein 1) |Mouse (Mus musculus) [TaxId: 10090]
d1nr5b_ : (SER272) (ALA353) [view usage] : e.22.1.1 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Dehydroquinate synthase, DHQS |Dehydroquinate synthase, DHQS |Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]
d1j3ua_ : (THR141) (LYS252) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |L-aspartate ammonia lyase |Bacillus sp., ym55-1 [TaxId: 1409]
d1qlea_ : (TRP431) (ASN524) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial aa3 type cytochrome c oxidase subunit I |Paracoccus denitrificans [TaxId: 266]
d1m57a_ : (TRP451) (ASN532) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial aa3 type cytochrome c oxidase subunit I |Rhodobacter sphaeroides [TaxId: 1063]
d1foea1 : (ASP1037) (LYS1122) [view usage] : a.87.1.1 |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |GEF of TIAM1 (T-Lymphoma invasion and metastasis inducing protein 1) |Mouse (Mus musculus) [TaxId: 10090]
d1occa_ : (TRP396) (GLY497) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Mitochondrial cytochrome c oxidase, subunit I |Cow (Bos taurus) [TaxId: 9913]
d3ehba_ : (GLU442) (ASN524) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |automated matches |Paracoccus denitrificans [TaxId: 266]
d1w6ja2 : (PRO190) (TYR264) [view usage] : a.102.4.2 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Terpene synthases |Lanosterol synthase |Human (Homo sapiens) [TaxId: 9606]
d1qvra1 : (THR7) (GLN81) [view usage] : a.174.1.1 |Double Clp-N motif |Double Clp-N motif |Double Clp-N motif |N-terminal domain of ClpB (heat shock protein F84.1) |Thermus thermophilus [TaxId: 274]
d3omnc_ : (TYR422) (ASN532) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |automated matches |Rhodobacter sphaeroides [TaxId: 272943]
d1nvfa_ : (SER272) (ALA353) [view usage] : e.22.1.1 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Dehydroquinate synthase, DHQS |Dehydroquinate synthase, DHQS |Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]
d1azwa_ : (LEU174) (ALA254) [view usage] : c.69.1.7 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Proline iminopeptidase-like |Proline iminopeptidase |Xanthomonas campestris, pv. citri [TaxId: 339]
d2gsmc_ : (HIS421) (ASN532) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial aa3 type cytochrome c oxidase subunit I |Rhodobacter sphaeroides [TaxId: 1063]
d3dtua_ : (HIS421) (ASN532) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial aa3 type cytochrome c oxidase subunit I |Rhodobacter sphaeroides [TaxId: 1063]
d1vnca_ : (PRO47) (SER180) [view usage] : a.111.1.3 |Acid phosphatase/Vanadium-dependent haloperoxidase |Acid phosphatase/Vanadium-dependent haloperoxidase |Chloroperoxidase |Chloroperoxidase |Curvularia inaequalis [TaxId: 38902]
d1m56a_ : (TRP439) (ASN532) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial aa3 type cytochrome c oxidase subunit I |Rhodobacter sphaeroides [TaxId: 1063]
d3om3a_ : (TYR414) (ASN532) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |automated matches |Rhodobacter sphaeroides [TaxId: 272943]
d3qjqa_ : (ALA379) (ALA504) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial ba3 type cytochrome c oxidase subunit I |Thermus thermophilus [TaxId: 274]
d1foee1 : (SER1036) (LYS1122) [view usage] : a.87.1.1 |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |GEF of TIAM1 (T-Lymphoma invasion and metastasis inducing protein 1) |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.69, a.102, a.127, e.22, f.24, a.111, a.87, a.174