Tableau information
Concept source: d2asra_ amino acid (a.a.) range (VAL41)(ILE179)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL41) (MET76) H1
(ASN80) (SER109) H2
(ALA118) (ASP142) H3
(THR146) (GLN152) H4
(GLN155) (ILE179) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -160.7° H2
H3 22.8° -154.1° H3
H4 -134.9° 46.7° -157.2° H4
H5 -163.7° 35.6° -149.8° 47.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.5° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3atpb_ : (THR45) (SER188) [view usage] : a.24.2.0 |Four-helical up-and-down bundle |Aspartate receptor, ligand-binding domain |automated matches |automated matches |Escherichia coli [TaxId: 316407]
d1vcsa1 : (GLN12) (ALA96) [view usage] : a.47.2.1 |STAT-like |t-snare proteins |t-snare proteins |Vesicle transport v-SNARE protein Vti1-like 2 |Mouse (Mus musculus) [TaxId: 10090]
d1cyla_ : (ILE5) (LYS126) [view usage] : a.26.1.2 |4-helical cytokines |4-helical cytokines |Short-chain cytokines |Interleukin-4 (IL-4) |Human (Homo sapiens) [TaxId: 9606]
d3fyec_ : (VAL273) (HIS411) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial aa3 type cytochrome c oxidase subunit I |Rhodobacter sphaeroides [TaxId: 1063]
d2d4ub_ : (LEU33) (ASN185) [view usage] : a.24.2.0 |Four-helical up-and-down bundle |Aspartate receptor, ligand-binding domain |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1vlta_ : (PHE40) (GLU173) [view usage] : a.24.2.1 |Four-helical up-and-down bundle |Aspartate receptor, ligand-binding domain |Aspartate receptor, ligand-binding domain |Aspartate receptor, ligand-binding domain |Salmonella typhimurium [TaxId: 90371]
d1gnca_ : (GLN12) (LEU172) [view usage] : a.26.1.1 |4-helical cytokines |4-helical cytokines |Long-chain cytokines |Granulocyte-colony stimulating factor (G-CSF) |Human (Homo sapiens) [TaxId: 9606]
d2b8ya_ : (THR6) (SER128) [view usage] : a.26.1.2 |4-helical cytokines |4-helical cytokines |Short-chain cytokines |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1emra_ : (LEU23) (GLN179) [view usage] : a.26.1.1 |4-helical cytokines |4-helical cytokines |Long-chain cytokines |Leukemia inhibitory factor (LIF) |Human (Homo sapiens) [TaxId: 9606]
d1liha_ : (SER32) (GLN178) [view usage] : a.24.2.1 |Four-helical up-and-down bundle |Aspartate receptor, ligand-binding domain |Aspartate receptor, ligand-binding domain |Aspartate receptor, ligand-binding domain |Salmonella typhimurium [TaxId: 90371]
d2d4ua_ : (GLY24) (ALA187) [view usage] : a.24.2.0 |Four-helical up-and-down bundle |Aspartate receptor, ligand-binding domain |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1jmwa_ : (ASN36) (LEU175) [view usage] : a.24.2.1 |Four-helical up-and-down bundle |Aspartate receptor, ligand-binding domain |Aspartate receptor, ligand-binding domain |Aspartate receptor, ligand-binding domain |Salmonella typhimurium [TaxId: 90371]
d1pvhb_ : (LEU22) (GLN171) [view usage] : a.26.1.1 |4-helical cytokines |4-helical cytokines |Long-chain cytokines |Leukemia inhibitory factor (LIF) |Human (Homo sapiens) [TaxId: 9606]
d2asra_ : (VAL41) (ILE179) [view usage] : a.24.2.1 |Four-helical up-and-down bundle |Aspartate receptor, ligand-binding domain |Aspartate receptor, ligand-binding domain |Aspartate receptor, ligand-binding domain |Escherichia coli [TaxId: 562]
d1st6a4 : (LYS373) (ASN483) [view usage] : a.24.9.1 |Four-helical up-and-down bundle |alpha-catenin/vinculin-like |alpha-catenin/vinculin |Vinculin |Chicken (Gallus gallus) [TaxId: 9031]
d2liga_ : (SER32) (ASP181) [view usage] : a.24.2.1 |Four-helical up-and-down bundle |Aspartate receptor, ligand-binding domain |Aspartate receptor, ligand-binding domain |Aspartate receptor, ligand-binding domain |Salmonella typhimurium [TaxId: 90371]
d1w36c2 : (THR486) (ALA579) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Exodeoxyribonuclease V gamma chain (RecC), N-terminal domain |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.37, f.24, a.24, a.26, a.47