Tableau information
Concept source: d1zykc2 amino acid (a.a.) range (SER265)(SER343)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER265) (GLY279) H1
(HIS283) (ASP300) H2
(ASP304) (SER319) H3
(SER319) (ASN330) H4
(VAL333) (SER343) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -77.6° H2
H3 -101.5° 118.6° H3
H4 -133.5° 79.5° 56.8° H4
H5 -73.7° -128.5° -108.5° 148.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1n7oa1 : (ASP366) (GLN436) [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1g8ka2 : (THR305) (SER367) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Arsenite oxidase large subunit |Alcaligenes faecalis [TaxId: 511]
d1gxbd2 : (SER265) (SER344) [view usage] : c.27.1.1 |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Anthranilate phosphoribosyltransferase (TrpD) |Sulfolobus solfataricus [TaxId: 2287]
d1g8ja2 : (THR305) (SER367) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Arsenite oxidase large subunit |Alcaligenes faecalis [TaxId: 511]
d1kqfc_ : (PHE12) (ILE80) [view usage] : f.21.1.1 |Heme-binding four-helical bundle |Transmembrane di-heme cytochromes |Formate dehydrogenase N, cytochrome (gamma) subunit |Formate dehydrogenase N, cytochrome (gamma) subunit |Escherichia coli [TaxId: 562]
d1zykc2 : (SER265) (SER343) [view usage] : c.27.1.1 |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Anthranilate phosphoribosyltransferase (TrpD) |Sulfolobus solfataricus [TaxId: 2287]
d1zxya2 : (SER265) (SER344) [view usage] : c.27.1.1 |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Anthranilate phosphoribosyltransferase (TrpD) |Sulfolobus solfataricus [TaxId: 2287]
d1c20a_ : (GLY68) (ARG130) [view usage] : a.4.3.1 |DNA/RNA-binding 3-helical bundle |ARID-like |ARID domain |DNA-binding domain from the dead ringer protein |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1azya2 : (ASN252) (LEU334) [view usage] : c.27.1.1 |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Thymidine phosphorylase |Escherichia coli [TaxId: 562]
d1n7pa1 : (ASP366) (GLN436) [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d3h5qa2 : (ASN249) (LEU329) [view usage] : c.27.1.0 |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
d3dssb_ : (LEU20) (ASN67) [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Rab geranylgeranyltransferase, beta subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1h2ub1 : (GLN163) (GLN215) [view usage] : a.118.1.14 |alpha-alpha superhelix |ARM repeat |MIF4G domain-like |CBP80, 80KDa nuclear cap-binding protein |Human (Homo sapiens) [TaxId: 9606]
d3gbrb2 : (SER265) (SER344) [view usage] : c.27.1.1 |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Anthranilate phosphoribosyltransferase (TrpD) |Sulfolobus solfataricus [TaxId: 2287]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.81, a.118, a.102, f.21, a.4, c.27