Tableau information
Concept source: d3nd2a_ amino acid (a.a.) range (GLY363)(ASP440)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY363) (ALA380) H1
(ASN382) (MET397) H2
(ASP401) (ALA412) H3
(LEU413) (LEU419) H4
(SER424) (ASP440) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -153.3° H2
H3 -6.4° -148.1° H3
H4 48.0° -129.9° -52.8° H4
H5 -146.1° 12.3° -140.0° -138.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1f1sa1 : (ILE438) (PHE526) [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Hyaluronate lyase |Streptococcus agalactiae [TaxId: 1311]
d2o36a_ : (SER29) (GLY153) [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |Neurolysin (endopeptidase 24.16, thimet oligopeptidase) |Human (Homo sapiens) [TaxId: 9606]
d1h2ua1 : (ASN120) (ARG206) [view usage] : a.118.1.14 |alpha-alpha superhelix |ARM repeat |MIF4G domain-like |CBP80, 80KDa nuclear cap-binding protein |Human (Homo sapiens) [TaxId: 9606]
d2grmb2 : (ILE134) (ARG205) [view usage] : a.118.8.4 |alpha-alpha superhelix |TPR-like |PrgX C-terminal domain-like |automated matches |Enterococcus faecalis [TaxId: 1351]
d4arxa1 : (GLU90) (TRP219) [view usage] : f.1.3.1 |Toxins' membrane translocation domains |delta-Endotoxin (insectocide), N-terminal domain |delta-Endotoxin (insectocide), N-terminal domain |automated matches |Bacillus thuringiensis [TaxId: 29339]
d1v5ca_ : (ASP183) (TYR283) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |Chitosanase |Bacillus sp., strain k17 [TaxId: 1409]
d2o3ea_ : (SER30) (LYS136) [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1hv6a_ : (PHE233) (GLY326) [view usage] : a.102.3.1 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Alginate lyase A1-III |Alginate lyase A1-III |Sphingomonas sp., A1 [TaxId: 28214]
d1ibrd_ : (ASP362) (LEU439) [view usage] : a.118.1.1 |alpha-alpha superhelix |ARM repeat |Armadillo repeat |Importin beta |Human (Homo sapiens) [TaxId: 9606]
d1s63a_ : (TYR292) (SER365) [view usage] : a.118.6.1 |alpha-alpha superhelix |Protein prenylyltransferase |Protein prenylyltransferase |Protein farnesyltransferase alpha-subunit |Human (Homo sapiens) [TaxId: 9606]
d1gnwa1 : (ASN92) (PRO192) [view usage] : a.45.1.1 |GST C-terminal domain-like |GST C-terminal domain-like |Glutathione S-transferase (GST), C-terminal domain |Class phi GST |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2pf4a_ : (ILE482) (ILE547) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Mouse (Mus musculus) [TaxId: 10090]
d4fyra4 : (GLU806) (ASN868) [view usage] : a.118.1.0 |alpha-alpha superhelix |ARM repeat |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ukla_ : (ILE801) (ASN874) [view usage] : a.118.1.1 |alpha-alpha superhelix |ARM repeat |Armadillo repeat |Importin beta |Mouse (Mus musculus) [TaxId: 10090]
d2nppb1 : (THR272) (ASN342) [view usage] : a.118.1.20 |alpha-alpha superhelix |ARM repeat |B56-like |Serine/threonine-protein phosphatase 2A regulatory subunit B56-gamma |Human (Homo sapiens) [TaxId: 9606]
d4i5na_ : (ILE483) (LYS546) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Human (Homo sapiens) [TaxId: 9606]
d2nyla1 : (LEU404) (LYS472) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Human (Homo sapiens) [TaxId: 9606]
d2nyla1 : (THR518) (SER587) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Human (Homo sapiens) [TaxId: 9606]
d1dg3a1 : (SER416) (GLY564) [view usage] : a.114.1.1 |Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain |Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain |Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain |Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1h2tc1 : (ASN120) (ARG206) [view usage] : a.118.1.14 |alpha-alpha superhelix |ARM repeat |MIF4G domain-like |CBP80, 80KDa nuclear cap-binding protein |Human (Homo sapiens) [TaxId: 9606]
d1bpoa1 : (ARG437) (ASN483) [view usage] : a.118.1.4 |alpha-alpha superhelix |ARM repeat |Clathrin heavy-chain linker domain |Clathrin heavy-chain linker domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1gxna_ : (ALA392) (GLN499) [view usage] : a.102.5.1 |alpha/alpha toroid |Family 10 polysaccharide lyase |Family 10 polysaccharide lyase |Polygalacturonic acid lyase (pectate lyase) |Cellvibrio cellulosa [TaxId: 155077]
d2pf4c_ : (GLY275) (ASP336) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Mouse (Mus musculus) [TaxId: 10090]
d1ee4a_ : (LEU436) (PHE509) [view usage] : a.118.1.1 |alpha-alpha superhelix |ARM repeat |Armadillo repeat |Karyopherin alpha |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2okua1 : (GLY454) (ALA557) [view usage] : a.48.5.1 |N-cbl like |PG0775 C-terminal domain-like |PG0775 C-terminal domain-like |Uncharacterized protein PG0775 |Porphyromonas gingivalis [TaxId: 837]
d2nxpa1 : (ASP210) (THR286) [view usage] : d.379.1.1 |Taf5 N-terminal domain-like |Taf5 N-terminal domain-like |Taf5 N-terminal domain-like |TAF5 subunit of TFIID |Human (Homo sapiens) [TaxId: 9606]
d4arxb1 : (GLU90) (TRP219) [view usage] : f.1.3.1 |Toxins' membrane translocation domains |delta-Endotoxin (insectocide), N-terminal domain |delta-Endotoxin (insectocide), N-terminal domain |automated matches |Bacillus thuringiensis [TaxId: 29339]
d2vglb_ : (GLU315) (LYS383) [view usage] : a.118.1.10 |alpha-alpha superhelix |ARM repeat |Clathrin adaptor core protein |Adaptin beta subunit N-terminal fragment |Human (Homo sapiens) [TaxId: 9606]
d2vglb_ : (SER387) (GLU454) [view usage] : a.118.1.10 |alpha-alpha superhelix |ARM repeat |Clathrin adaptor core protein |Adaptin beta subunit N-terminal fragment |Human (Homo sapiens) [TaxId: 9606]
d1loha1 : (GLY354) (GLN436) [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1b3ua_ : (LEU521) (SER586) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Human (Homo sapiens) [TaxId: 9606]
d2xola_ : (ALA65) (VAL164) [view usage] : a.184.1.1 |TorD-like |TorD-like |TorD-like |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d4pu2a4 : (ILE694) (GLY752) [view usage] : a.118.1.27 |alpha-alpha superhelix |ARM repeat |Aminopeptidase N (APN) C-terminal-like |Aminopeptidase N (APN) C-terminal domain |Neisseria meningitidis [TaxId: 122586]
d1n7na1 : (GLY354) (GLN436) [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2grmc2 : (THR133) (ARG205) [view usage] : a.118.8.4 |alpha-alpha superhelix |TPR-like |PrgX C-terminal domain-like |automated matches |Enterococcus faecalis [TaxId: 1351]
d3tj3a_ : (VAL171) (CYS240) [view usage] : a.118.1.0 |alpha-alpha superhelix |ARM repeat |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3nd2a_ : (GLY363) (ASP440) [view usage] : a.118.1.1 |alpha-alpha superhelix |ARM repeat |Armadillo repeat |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3nd2a_ : (ASP789) (LEU861) [view usage] : a.118.1.1 |alpha-alpha superhelix |ARM repeat |Armadillo repeat |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3eqaa_ : (ASP150) (THR253) [view usage] : a.102.1.1 |alpha/alpha toroid |Six-hairpin glycosidases |Glucoamylase |automated matches |Aspergillus niger [TaxId: 5061]
d4fxyp_ : (SER30) (LYS136) [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1n7qa1 : (VAL358) (GLN436) [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2nylb1 : (THR272) (ASN342) [view usage] : a.118.1.20 |alpha-alpha superhelix |ARM repeat |B56-like |Serine/threonine-protein phosphatase 2A regulatory subunit B56-gamma |Human (Homo sapiens) [TaxId: 9606]
d2ahfa_ : (ALA240) (LEU364) [view usage] : a.102.1.7 |alpha/alpha toroid |Six-hairpin glycosidases |Glycosyl Hydrolase Family 88 |automated matches |Bacillus sp. [TaxId: 84635]
d1uw4b_ : (ASN865) (LEU959) [view usage] : a.118.1.14 |alpha-alpha superhelix |ARM repeat |MIF4G domain-like |Regulator of nonsense transcripts 2, UPF2 |Human (Homo sapiens) [TaxId: 9606]
d2jkrb_ : (PHE369) (SER438) [view usage] : a.118.1.10 |alpha-alpha superhelix |ARM repeat |Clathrin adaptor core protein |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1lsha1 : (GLU470) (ASN539) [view usage] : a.118.4.1 |alpha-alpha superhelix |Lipovitellin-phosvitin complex, superhelical domain |Lipovitellin-phosvitin complex, superhelical domain |Lipovitellin-phosvitin complex, superhelical domain |Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]
d3tgza2 : (ASN100) (ARG216) [view usage] : a.45.1.1 |GST C-terminal domain-like |GST C-terminal domain-like |Glutathione S-transferase (GST), C-terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4e76a_ : (THR389) (ALA461) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Hepatitis C virus [TaxId: 356411]
d2j49a1 : (ASN151) (LEU219) [view usage] : d.379.1.1 |Taf5 N-terminal domain-like |Taf5 N-terminal domain-like |Taf5 N-terminal domain-like |TAF5 subunit of TFIID |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4chsa2 : (PRO89) (GLN191) [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Soybean (Glycine max) [TaxId: 3847]
d3vk9c2 : (ASP125) (MET213) [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Silkworm (Bombyx mori) [TaxId: 7091]
d3vk9a2 : (ASP125) (MET213) [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Silkworm (Bombyx mori) [TaxId: 7091]
d2j4be_ : (GLN18) (PHE86) [view usage] : d.379.1.1 |Taf5 N-terminal domain-like |Taf5 N-terminal domain-like |Taf5 N-terminal domain-like |automated matches |Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, a.118, a.102, d.92, a.45, f.1, a.184, a.114, a.48, d.379