Tableau information
Concept source: d2opoa_ amino acid (a.a.) range (THR6)(ASP81)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR6) (ASP21) H1
(SER29) (SER42) H2
(THR44) (ILE55) H3
(SER64) (ASN75) H4
(ASN75) (ASP81) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 101.0° H2
H3 -147.0° -94.4° H3
H4 -85.2° 163.4° 88.2° H4
H5 37.7° -89.4° -114.6° -104.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2vjta_ : (SER2) (TYR73) [view usage] : a.1.1.3 |Globin-like |Globin-like |Phycocyanin-like phycobilisome proteins |automated matches |Gloeobacter violaceus [TaxId: 33072]
d1pula1 : (ASP20) (LYS73) [view usage] : a.39.1.11 |EF Hand-like |EF-hand |p25-alpha |Hypothetical protein c32e8.3 |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d1vw4b_ : (MET100) (LYS150) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, mitochondrial (54S or 39S subunit) |Saccharomyces cerevisiae [TaxId: 4932]
d1i94m_ : (ARG14) (ARG94) [view usage] : a.156.1.1 |S13-like H2TH domain |S13-like H2TH domain |Ribosomal protein S13 |Ribosomal protein S13 |Thermus thermophilus [TaxId: 274]
d4n4ne_ : (HIS107) (GLY156) [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |automated matches |Nitrosomonas europaea [TaxId: 915]
d4m2pa_ : (ASP82) (HIS140) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Recoverin |Cow (Bos taurus) [TaxId: 9913]
d1k9ua_ : (ASP3) (PHE78) [view usage] : a.39.1.10 |EF Hand-like |EF-hand |Polcalcin |Polcalcin phl p 7 |Timothy grass (Phleum pratense) [TaxId: 15957]
d4kk6a_ : (ILE215) (SER313) [view usage] : f.20.1.1 |Clc chloride channel |Clc chloride channel |Clc chloride channel |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2opod_ : (THR6) (PHE86) [view usage] : a.39.1.10 |EF Hand-like |EF-hand |Polcalcin |Polcalcin Che a 3 |Pigweed (Chenopodium album) [TaxId: 3559]
d2nwwa1 : (VAL12) (ILE113) [view usage] : f.49.1.1 |Proton glutamate symport protein |Proton glutamate symport protein |Proton glutamate symport protein |Proton glutamate symport protein |Pyrococcus horikoshii [TaxId: 53953]
d1zhwa_ : (ASP0) (TYR64) [view usage] : d.338.1.1 |Oxysterol-binding protein-like |Oxysterol-binding protein-like |Oxysterol-binding protein |Oxysterol-binding protein homolog 4, KES1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4dj4a_ : (GLN154) (LEU221) [view usage] : a.124.1.0 |Phospholipase C/P1 nuclease |Phospholipase C/P1 nuclease |automated matches |automated matches |Solanum lycopersicum [TaxId: 4081]
d1ht9a_ : (PRO3) (ILE73) [view usage] : a.39.1.1 |EF Hand-like |EF-hand |Calbindin D9K |Calbindin D9K |Cow (Bos taurus) [TaxId: 9913]
d2opoc_ : (PRO7) (PHE86) [view usage] : a.39.1.10 |EF Hand-like |EF-hand |Polcalcin |Polcalcin Che a 3 |Pigweed (Chenopodium album) [TaxId: 3559]
d2opoa_ : (THR6) (ASP81) [view usage] : a.39.1.10 |EF Hand-like |EF-hand |Polcalcin |Polcalcin Che a 3 |Pigweed (Chenopodium album) [TaxId: 3559]
d4ky0c_ : (LYS17) (VAL115) [view usage] : f.49.1.1 |Proton glutamate symport protein |Proton glutamate symport protein |Proton glutamate symport protein |automated matches |Thermococcus kodakarensis [TaxId: 69014]
d1ggha2 : (PRO44) (GLU120) [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase II |Escherichia coli, HPII [TaxId: 562]
d4m2oa_ : (ASP82) (HIS140) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Recoverin |Cow (Bos taurus) [TaxId: 9913]
d3fwca_ : (LEU95) (CYS158) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3i9v11 : (TYR18) (PHE78) [view usage] : c.142.1.1 |Nqo1 FMN-binding domain-like |Nqo1 FMN-binding domain-like |Nqo1 FMN-binding domain-like |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d4arva_ : (HIS126) (GLY185) [view usage] : c.60.1.0 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |automated matches |automated matches |Yersinia kristensenii [TaxId: 28152]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.5, i.1, f.20, c.60, a.1, a.39, a.138, a.124, c.142, d.338, a.156, f.49