Tableau information
Concept source: d1wrkb_ amino acid (a.a.) range (TYR5)(ARG83)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(TYR5) (GLN11) H1
(THR13) (LEU29) H2
(SER37) (GLY49) H3
(THR53) (ASP65) H4
(ASP73) (ARG83) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -104.4° H2
H3 63.2° 104.1° H3
H4 -82.7° -133.8° 119.0° H4
H5 100.9° 112.5° -41.5° 110.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4mlwa_ : (GLY7) (MET92) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Recoverin |Cow (Bos taurus) [TaxId: 9913]
d1avsa_ : (GLN7) (LYS87) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Troponin C |Chicken (Gallus gallus) [TaxId: 9031]
d1gv3a1 : (GLY46) (MET124) [view usage] : a.2.11.1 |Long alpha-hairpin |Fe,Mn superoxide dismutase (SOD), N-terminal domain |Fe,Mn superoxide dismutase (SOD), N-terminal domain |Mn superoxide dismutase (MnSOD) |Anabaena sp. [TaxId: 1167]
d3ts5e_ : (ASN12) (LEU85) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Placopecten magellanicus [TaxId: 6577]
d2m3sa_ : (LEU2) (MET79) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |Chicken (Gallus gallus) [TaxId: 9031]
d1jowa2 : (ALA177) (LEU248) [view usage] : a.74.1.1 |Cyclin-like |Cyclin-like |Cyclin |Viral cyclin |Herpesvirus saimiri [TaxId: 10381]
d1wrld_ : (TYR5) (ARG83) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1s6ja_ : (GLU21) (ALA83) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calcium-dependent protein kinase sk5 CLD |Soybean (Glycine max) [TaxId: 3847]
d1xa6a1 : (ASP276) (LEU357) [view usage] : a.116.1.1 |GTPase activation domain, GAP |GTPase activation domain, GAP |BCR-homology GTPase activation domain (BH-domain) |Beta-chimaerin, C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1sw8a_ : (LEU4) (THR79) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |Human (Homo sapiens) [TaxId: 9606]
d2jt0a_ : (ASP3) (LYS86) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1wrlb_ : (ASP3) (SER84) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3rv5a_ : (ILE4) (CYS84) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Troponin C |Human (Homo sapiens), cardiac isoform [TaxId: 9606]
d1kqmb_ : (GLN16) (LEU80) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Myosin Essential Chain |Bay scallop (Aequipecten irradians) [TaxId: 31199]
d2koka_ : (ASP43) (PRO91) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Brucella abortus [TaxId: 235]
d1j1dd_ : (ILE4) (ASP87) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Troponin C |Human (Homo sapiens), cardiac isoform [TaxId: 9606]
d2ctna_ : (TYR5) (SER89) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Troponin C |Chicken (Gallus gallus) [TaxId: 9031]
d3fk2a_ : (PRO1250) (LEU1328) [view usage] : a.116.1.0 |GTPase activation domain, GAP |GTPase activation domain, GAP |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3tjta1 : (ALA40) (MET118) [view usage] : a.2.11.0 |Long alpha-hairpin |Fe,Mn superoxide dismutase (SOD), N-terminal domain |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d3j38j_ : (LEU95) (ARG151) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Drosophila melanogaster [TaxId: 7227]
d1wrka_ : (TYR5) (SER84) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2xzmg_ : (ASP26) (ASN113) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Tetrahymena thermophila [TaxId: 5911]
d1tnwa_ : (ASP5) (MET86) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Troponin C |Chicken (Gallus gallus) [TaxId: 9031]
d1tnwa_ : (LYS87) (VAL161) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Troponin C |Chicken (Gallus gallus) [TaxId: 9031]
d3sasa2 : (GLU137) (VAL215) [view usage] : a.156.1.2 |S13-like H2TH domain |S13-like H2TH domain |Middle domain of MutM-like DNA repair proteins |DNA repair protein MutM (Fpg) |Bacillus stearothermophilus [TaxId: 1422]
d2ggza_ : (PHE73) (ASP161) [view usage] : a.39.1.0 |EF Hand-like |EF-hand |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1smga_ : (ASP5) (LYS87) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Troponin C |Chicken (Gallus gallus) [TaxId: 9031]
d1wrkb_ : (TYR5) (ARG83) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1nyaa_ : (VAL83) (PHE167) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calerythrin |Saccharopolyspora erythraea [TaxId: 1836]
d1avsb_ : (GLN6) (LYS87) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Troponin C |Chicken (Gallus gallus) [TaxId: 9031]
d2kfxt_ : (ASP3) (ASP87) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2jnfa_ : (GLU87) (GLY155) [view usage] : a.39.1.0 |EF Hand-like |EF-hand |automated matches |automated matches |Lethocerus indicus [TaxId: 212017]
d2kgbc_ : (ASP2) (LYS86) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3pn7e_ : (ASN12) (LEU85) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Placopecten magellanicus [TaxId: 6577]
d1mn8a_ : (THR7) (PRO93) [view usage] : a.61.1.6 |Retroviral matrix proteins |Retroviral matrix proteins |MMLV matrix protein-like |MMLV matrix protein |Moloney murine leukemia virus, MoMLV [TaxId: 11801]
d3gq3a2 : (GLU137) (ALA214) [view usage] : a.156.1.2 |S13-like H2TH domain |S13-like H2TH domain |Middle domain of MutM-like DNA repair proteins |DNA repair protein MutM (Fpg) |Bacillus stearothermophilus [TaxId: 1422]
d2ocea1 : (LEU481) (ALA554) [view usage] : a.60.2.6 |SAM domain-like |RuvA domain 2-like |Tex HhH-containing domain-like |Transcriptional accessory factor Tex |Pseudomonas aeruginosa [TaxId: 287]
d3rv5b_ : (LYS6) (MSE81) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Troponin C |Human (Homo sapiens), cardiac isoform [TaxId: 9606]
d1la0a_ : (ASP3) (ARG83) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Troponin C |Chicken (Gallus gallus) [TaxId: 9031]
d1aj4a_ : (TYR5) (LYS90) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Troponin C |Chicken (Gallus gallus) [TaxId: 9031]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
i.1, c.47, a.39, a.74, a.116, a.60, a.61, a.156, a.2