Tableau information
Concept source: d1jraa_ amino acid (a.a.) range (ASP8)(ASP108)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP8) (PHE29) H1
(THR34) (LEU51) H2
(GLY55) (LYS67) H3
(SER74) (LEU93) H4
(THR102) (ASP108) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -175.0° H2
H3 -29.1° -145.9° H3
H4 -159.6° -15.9° 130.6° H4
H5 -109.7° 75.2° -138.8° 90.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.5° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1jr8b_ : (HIS23) (ASP108) [view usage] : a.24.15.1 |Four-helical up-and-down bundle |FAD-dependent thiol oxidase |FAD-dependent thiol oxidase |Thiol oxidase Erv2p |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4e0ib_ : (ASP86) (TRP183) [view usage] : a.24.15.0 |Four-helical up-and-down bundle |FAD-dependent thiol oxidase |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d3w4ya_ : (ASP86) (LYS184) [view usage] : a.24.15.0 |Four-helical up-and-down bundle |FAD-dependent thiol oxidase |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d1oqca_ : (ASP18) (TRP115) [view usage] : a.24.15.1 |Four-helical up-and-down bundle |FAD-dependent thiol oxidase |FAD-dependent thiol oxidase |Augmenter of liver regeneration |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3w4yc_ : (ASP86) (TRP183) [view usage] : a.24.15.0 |Four-helical up-and-down bundle |FAD-dependent thiol oxidase |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d3u5sa_ : (ASP98) (VAL191) [view usage] : a.24.15.1 |Four-helical up-and-down bundle |FAD-dependent thiol oxidase |FAD-dependent thiol oxidase |Augmenter of liver regeneration |Human (Homo sapiens) [TaxId: 9606]
d1jr8a_ : (ASP7) (ASP108) [view usage] : a.24.15.1 |Four-helical up-and-down bundle |FAD-dependent thiol oxidase |FAD-dependent thiol oxidase |Thiol oxidase Erv2p |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2hj3b_ : (THR10) (TRP107) [view usage] : a.24.15.0 |Four-helical up-and-down bundle |FAD-dependent thiol oxidase |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d4a8oa_ : (ILE518) (ASP624) [view usage] : e.8.1.6 |DNA/RNA polymerases |DNA/RNA polymerases |dsRNA phage RNA-dependent RNA-polymerase |dsRNA phage RNA-dependent RNA-polymerase |Bacteriophage PHI-6 [TaxId: 10879]
d1jrad_ : (HIS23) (ASP108) [view usage] : a.24.15.1 |Four-helical up-and-down bundle |FAD-dependent thiol oxidase |FAD-dependent thiol oxidase |Thiol oxidase Erv2p |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1jraa_ : (ASP8) (ASP108) [view usage] : a.24.15.1 |Four-helical up-and-down bundle |FAD-dependent thiol oxidase |FAD-dependent thiol oxidase |Thiol oxidase Erv2p |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2hj3a_ : (THR10) (TRP107) [view usage] : a.24.15.0 |Four-helical up-and-down bundle |FAD-dependent thiol oxidase |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, a.24