Tableau information
Concept source: d1sr2a_ amino acid (a.a.) range (TYR810)(LEU890)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(TYR810) (ASP816) H1
(VAL818) (SER832) H2
(ASP833) (ASN852) H3
(LEU853) (LYS870) H4
(ASP871) (LEU890) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 25.6° H2
H3 -165.5° -155.7° H3
H4 29.0° 16.8° -161.6° H4
H5 -137.4° -161.1° 35.6° -161.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3dbyn2 : (GLU129) (GLY251) [view usage] : a.29.13.1 |Bromodomain-like |Bacillus cereus metalloprotein-like |Bacillus cereus metalloprotein-like |Uncharacterized protein BCE_G9241_0798 |Bacillus cereus [TaxId: 1396]
d4fzob_ : (ARG4) (HIS74) [view usage] : a.8.11.1 |immunoglobulin/albumin-binding domain-like |AF1782-like |AF1782-like |automated matches |Methanothermobacter thermautotrophicus [TaxId: 187420]
d3dbyl2 : (GLU129) (GLY251) [view usage] : a.29.13.1 |Bromodomain-like |Bacillus cereus metalloprotein-like |Bacillus cereus metalloprotein-like |Uncharacterized protein BCE_G9241_0798 |Bacillus cereus [TaxId: 1396]
d1l7ca1 : (SER391) (THR506) [view usage] : a.24.9.1 |Four-helical up-and-down bundle |alpha-catenin/vinculin-like |alpha-catenin/vinculin |alpha-catenin |Mouse (Mus musculus) [TaxId: 10090]
d4erua_ : (THR5) (GLY128) [view usage] : a.25.1.4 |Ferritin-like |Ferritin-like |YciF-like |automated matches |Salmonella enterica [TaxId: 588858]
d1xg2b_ : (ASP32) (LEU148) [view usage] : a.29.6.0 |Bromodomain-like |Plant invertase/pectin methylesterase inhibitor |automated matches |automated matches |Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]
d2j9wb_ : (ASN124) (LEU219) [view usage] : a.24.28.0 |Four-helical up-and-down bundle |VPS28 C-terminal domain-like |automated matches |automated matches |African clawed frog (Xenopus laevis) [TaxId: 8355]
d3u2la_ : (ASP98) (GLY182) [view usage] : a.24.15.1 |Four-helical up-and-down bundle |FAD-dependent thiol oxidase |FAD-dependent thiol oxidase |Augmenter of liver regeneration |Human (Homo sapiens) [TaxId: 9606]
d2gscb_ : (ARG9) (ARG123) [view usage] : a.29.16.1 |Bromodomain-like |IVS-encoded protein-like |IVS-encoded protein-like |automated matches |Xanthomonas campestris pv. campestris [TaxId: 340]
d1p68a_ : (LEU5) (HIS101) [view usage] : k.8.1.1 |Designed four-helix bundle protein |Designed four-helix bundle protein |Designed four-helix bundle protein |De novo designed protein s-824 |Synthetic
d3dbyb2 : (GLU129) (GLY251) [view usage] : a.29.13.1 |Bromodomain-like |Bacillus cereus metalloprotein-like |Bacillus cereus metalloprotein-like |Uncharacterized protein BCE_G9241_0798 |Bacillus cereus [TaxId: 1396]
d3dbya2 : (GLU129) (GLY251) [view usage] : a.29.13.1 |Bromodomain-like |Bacillus cereus metalloprotein-like |Bacillus cereus metalloprotein-like |Uncharacterized protein BCE_G9241_0798 |Bacillus cereus [TaxId: 1396]
d1orjd_ : (ASN4003) (HIS4125) [view usage] : a.24.19.1 |Four-helical up-and-down bundle |Flagellar export chaperone FliS |Flagellar export chaperone FliS |Flagellar export chaperone FliS |Aquifex aeolicus [TaxId: 63363]
d3dbye2 : (GLU129) (GLY251) [view usage] : a.29.13.1 |Bromodomain-like |Bacillus cereus metalloprotein-like |Bacillus cereus metalloprotein-like |Uncharacterized protein BCE_G9241_0798 |Bacillus cereus [TaxId: 1396]
d1e2aa_ : (ARG3) (ARG102) [view usage] : a.7.2.1 |Spectrin repeat-like |Enzyme IIa from lactose specific PTS, IIa-lac |Enzyme IIa from lactose specific PTS, IIa-lac |Enzyme IIa from lactose specific PTS, IIa-lac |Lactococcus lactis [TaxId: 1358]
d2hfia1 : (THR5) (ASP121) [view usage] : a.24.26.1 |Four-helical up-and-down bundle |YppE-like |YppE-like |Hypothetical protein YppE |Bacillus subtilis [TaxId: 1423]
d2ehoh1 : (ASP108) (GLY192) [view usage] : a.278.1.3 |GINS helical bundle-like |GINS helical bundle-like |PSF3 C-terminal domain-like |GINS complex subunit 3, PSF3 |Human (Homo sapiens) [TaxId: 9606]
d2e9xc1 : (ASP1108) (LYS1191) [view usage] : a.278.1.3 |GINS helical bundle-like |GINS helical bundle-like |PSF3 C-terminal domain-like |GINS complex subunit 3, PSF3 |Human (Homo sapiens) [TaxId: 9606]
d2gyqb_ : (MET11) (GLY132) [view usage] : a.25.1.4 |Ferritin-like |Ferritin-like |YciF-like |Hypothetical ptotein RPA3308 |Rhodopseudomonas palustris [TaxId: 1076]
d1sr2a_ : (TYR810) (LEU890) [view usage] : a.24.10.4 |Four-helical up-and-down bundle |Histidine-containing phosphotransfer domain, HPT domain |Sensor-like histidine kinase YojN, C-terminal domain |Sensor-like histidine kinase YojN, C-terminal domain |Escherichia coli [TaxId: 562]
d1a5ea_ : (PRO81) (ALA133) [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |Cell cycle inhibitor p16ink4A |Human (Homo sapiens) [TaxId: 9606]
d2ooca1 : (PHE23) (LEU110) [view usage] : a.24.10.6 |Four-helical up-and-down bundle |Histidine-containing phosphotransfer domain, HPT domain |SphA-like |Histidine phosphotransferase ShpA |Caulobacter crescentus [TaxId: 155892]
d1nzea_ : (PRO44) (LEU148) [view usage] : a.24.18.1 |Four-helical up-and-down bundle |Oxygen-evolving enhancer protein 3, |Oxygen-evolving enhancer protein 3, |Oxygen-evolving enhancer protein 3, |Spinach (Spinacia oleracea) [TaxId: 3562]
d4erub_ : (THR5) (GLY128) [view usage] : a.25.1.4 |Ferritin-like |Ferritin-like |YciF-like |automated matches |Salmonella enterica [TaxId: 588858]
d2j9wa_ : (LEU125) (LEU219) [view usage] : a.24.28.0 |Four-helical up-and-down bundle |VPS28 C-terminal domain-like |automated matches |automated matches |African clawed frog (Xenopus laevis) [TaxId: 8355]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.211, a.25, a.29, a.24, a.278, a.8, a.7, k.8