Tableau information
Concept source: d4bcra_ amino acid (a.a.) range (GLU356)(TYR464)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU356) (LEU368) H1
(ASP372) (CYS385) H2
(VAL394) (SER414) H3
(LEU422) (GLU451) H4
(PRO458) (TYR464) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 125.0° H2
H3 -54.4° -160.4° H3
H4 -165.5° -64.1° 121.6° H4
H5 80.5° 58.7° -104.4° -113.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1gwxa_ : (LYS358) (TYR473) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Peroxisome proliferator-activated receptor delta, PPAR-DELTA |Human (Homo sapiens) [TaxId: 9606]
d1exaa_ : (ASP309) (LEU416) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Retinoic acid receptor gamma (RAR-gamma) |Human (Homo sapiens) [TaxId: 9606]
d1aa7a_ : (LEU3) (ALA83) [view usage] : a.95.1.1 |Influenza virus matrix protein M1 |Influenza virus matrix protein M1 |Influenza virus matrix protein M1 |Influenza virus matrix protein M1 |Influenza A virus [TaxId: 11320]
d1m2zd_ : (CYS643) (GLN760) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Glucocorticoid receptor |Human (Homo sapiens) [TaxId: 9606]
d2q0ta1 : (ASP163) (ALA257) [view usage] : a.152.1.1 |AhpD-like |AhpD-like |AhpD |Hypothetical protein Bxeno_B2006 |Burkholderia xenovorans [TaxId: 36873]
d1k7la_ : (MET355) (TYR464) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Peroxisome proliferator activated receptor alpha, PPAR-alpha |Human (Homo sapiens) [TaxId: 9606]
d1ikua_ : (TYR65) (LYS139) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Recoverin |Cow (Bos taurus) [TaxId: 9913]
d3mnpa_ : (ILE655) (GLN766) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2xhsa_ : (LEU912) (ALA1023) [view usage] : a.123.1.0 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d4jazb_ : (MET364) (TYR473) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Peroxisome proliferator activated receptor gamma, PPAR-gamma |Human (Homo sapiens) [TaxId: 9606]
d3ty0a_ : (GLU365) (LYS474) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Peroxisome proliferator activated receptor gamma, PPAR-gamma |Human (Homo sapiens) [TaxId: 9606]
d1aa7b_ : (LEU203) (LEU284) [view usage] : a.95.1.1 |Influenza virus matrix protein M1 |Influenza virus matrix protein M1 |Influenza virus matrix protein M1 |Influenza virus matrix protein M1 |Influenza A virus [TaxId: 11320]
d3erda_ : (GLY442) (LEU549) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Estrogen receptor alpha |Human (Homo sapiens) [TaxId: 9606]
d1xp1a_ : (VAL422) (ALA546) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Estrogen receptor alpha |Human (Homo sapiens) [TaxId: 9606]
d2yjab_ : (GLY442) (LEU544) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Estrogen receptor alpha |Human (Homo sapiens) [TaxId: 9606]
d4bcra_ : (GLU356) (TYR464) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Peroxisome proliferator activated receptor alpha, PPAR-alpha |Human (Homo sapiens) [TaxId: 9606]
d1ot7a_ : (SER355) (ILE465) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Bile acid receptor FXR |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3gn8a_ : (TYR109) (ALA235) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2gwxb_ : (GLU365) (MET476) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Peroxisome proliferator-activated receptor delta, PPAR-DELTA |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.123, a.152, a.39, a.95