Protein Concepts Dictionary

Tableau information

Concept source:  d1uz3a_  amino acid (a.a.) range (ARG15)(ARG99)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ARG15)   (GLY41) H1
	   (THR44)   (LEU58) H2
	   (SER61)   (ASP75) H3
	   (THR79)   (MET85) H4
	   (GLY87)   (ARG99) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
H2     -177.8°   H2                          
H3      -46.3°  131.5°   H3                   
H4      -37.7°  143.5°  -68.0°   H4            
H5      136.9°  -44.7° -155.7°  131.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1utua1 :    (SER12)   (ARG97)   [view usage] : a.283.1.1 |ENT-like |ENT-like |Emsy N terminal (ENT) domain-like |Emsy |Human (Homo sapiens) [TaxId: 9606]
 d1rqib_ :    (ALA89)  (GLY219)   [view usage] : a.128.1.1 |Terpenoid synthases |Terpenoid synthases |Isoprenyl diphosphate synthases |Farnesyl diphosphate synthase (geranyltranstransferase) |Escherichia coli [TaxId: 562]
 d1uz3b_ :     (THR9)  (ARG100)   [view usage] : a.283.1.1 |ENT-like |ENT-like |Emsy N terminal (ENT) domain-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2iona1 :   (HIS360)  (GLY437)   [view usage] : a.118.1.14 |alpha-alpha superhelix |ARM repeat |MIF4G domain-like |Programmed cell death 4, PDCD4 |Mouse (Mus musculus) [TaxId: 10090]
 d2fmme1 :    (SER12)   (ARG97)   [view usage] : a.283.1.1 |ENT-like |ENT-like |Emsy N terminal (ENT) domain-like |Emsy |Human (Homo sapiens) [TaxId: 9606]
 d1t0rb_ :   (ASP214)  (MET328)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouE |Pseudomonas stutzeri [TaxId: 316]
 d1rqia_ :    (ALA89)  (GLY219)   [view usage] : a.128.1.1 |Terpenoid synthases |Terpenoid synthases |Isoprenyl diphosphate synthases |Farnesyl diphosphate synthase (geranyltranstransferase) |Escherichia coli [TaxId: 562]
 d1utub_ :    (ARG13)   (ARG98)   [view usage] : a.283.1.1 |ENT-like |ENT-like |Emsy N terminal (ENT) domain-like |Emsy |Human (Homo sapiens) [TaxId: 9606]
 d2iola1 :   (HIS360)  (GLY437)   [view usage] : a.118.1.14 |alpha-alpha superhelix |ARM repeat |MIF4G domain-like |Programmed cell death 4, PDCD4 |Mouse (Mus musculus) [TaxId: 10090]
 d1uz3a_ :    (ARG15)   (ARG99)   [view usage] : a.283.1.1 |ENT-like |ENT-like |Emsy N terminal (ENT) domain-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1tkva_ :     (ILE5)   (ASN89)   [view usage] : a.150.1.1 |Anti-sigma factor AsiA |Anti-sigma factor AsiA |Anti-sigma factor AsiA |Anti-sigma factor AsiA |Bacteriophage T4 [TaxId: 10665]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.118,   a.128,    a.25,   a.283,   a.150