Protein Concepts Dictionary

Tableau information

Concept source:  d2g2da_  amino acid (a.a.) range (ASP30)(ASN177)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP30)   (GLY53) H1
	   (THR57)   (THR79) H2
	   (SER95)  (LEU111) H3
	  (SER123)  (HIS150) H4
	  (LEU157)  (ASN177) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
H2     -167.7°   H2                          
H3       36.6° -149.3°   H3                   
H4     -168.7°   19.5° -148.0°   H4            
H5       18.6° -160.5°   20.5° -168.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1woza_ :    (PRO23)  (ASN165)   [view usage] : a.25.2.0 |Ferritin-like |Cobalamin adenosyltransferase-like |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
 d3ke4c_ :    (ILE25)  (GLN171)   [view usage] : a.25.2.0 |Ferritin-like |Cobalamin adenosyltransferase-like |automated matches |automated matches |Bacillus cereus [TaxId: 226900]
 d3gaia_ :    (ASN49)  (GLN174)   [view usage] : a.25.2.0 |Ferritin-like |Cobalamin adenosyltransferase-like |automated matches |automated matches |Lactobacillus reuteri [TaxId: 1598]
 d1noga_ :    (VAL25)  (ASN165)   [view usage] : a.25.2.2 |Ferritin-like |Cobalamin adenosyltransferase-like |Cobalamin adenosyltransferase |Hypothetical protein Ta0546 |Thermoplasma acidophilum [TaxId: 2303]
 d2zhza_ :    (ASP30)  (GLY171)   [view usage] : a.25.2.0 |Ferritin-like |Cobalamin adenosyltransferase-like |automated matches |automated matches |Burkholderia thailandensis [TaxId: 57975]
 d1wvtc_ :    (SER24)  (ASN162)   [view usage] : a.25.2.0 |Ferritin-like |Cobalamin adenosyltransferase-like |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
 d2zhya_ :    (ASP30)  (GLY171)   [view usage] : a.25.2.0 |Ferritin-like |Cobalamin adenosyltransferase-like |automated matches |automated matches |Burkholderia thailandensis [TaxId: 57975]
 d2ah6c_ :    (ASP24)  (ALA163)   [view usage] : a.25.2.2 |Ferritin-like |Cobalamin adenosyltransferase-like |Cobalamin adenosyltransferase |automated matches |Bacillus halodurans [TaxId: 272558]
 d1wvta_ :    (SER24)  (ASN162)   [view usage] : a.25.2.0 |Ferritin-like |Cobalamin adenosyltransferase-like |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
 d3ke4a_ :    (ILE25)  (GLN171)   [view usage] : a.25.2.0 |Ferritin-like |Cobalamin adenosyltransferase-like |automated matches |automated matches |Bacillus cereus [TaxId: 226900]
 d3ke5c_ :    (ILE25)  (GLN171)   [view usage] : a.25.2.0 |Ferritin-like |Cobalamin adenosyltransferase-like |automated matches |automated matches |Bacillus cereus [TaxId: 226900]
 d1wvtb_ :    (ASP23)  (ASN162)   [view usage] : a.25.2.0 |Ferritin-like |Cobalamin adenosyltransferase-like |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
 d2zhyc_ :    (ASP30)  (ALA169)   [view usage] : a.25.2.0 |Ferritin-like |Cobalamin adenosyltransferase-like |automated matches |automated matches |Burkholderia thailandensis [TaxId: 57975]
 d2zhyb_ :    (ALA31)  (ALA170)   [view usage] : a.25.2.0 |Ferritin-like |Cobalamin adenosyltransferase-like |automated matches |automated matches |Burkholderia thailandensis [TaxId: 57975]
 d3ci4a_ :    (PRO26)  (GLN174)   [view usage] : a.25.2.0 |Ferritin-like |Cobalamin adenosyltransferase-like |automated matches |automated matches |Lactobacillus reuteri [TaxId: 1598]
 d3gaha_ :    (ASN49)  (GLN174)   [view usage] : a.25.2.0 |Ferritin-like |Cobalamin adenosyltransferase-like |automated matches |automated matches |Lactobacillus reuteri [TaxId: 1598]
 d3ke4b_ :    (ASP21)  (GLN171)   [view usage] : a.25.2.0 |Ferritin-like |Cobalamin adenosyltransferase-like |automated matches |automated matches |Bacillus cereus [TaxId: 226900]
 d3ke5b_ :    (ASP24)  (GLN171)   [view usage] : a.25.2.0 |Ferritin-like |Cobalamin adenosyltransferase-like |automated matches |automated matches |Bacillus cereus [TaxId: 226900]
 d2ah6b_ :    (ASP34)  (GLN173)   [view usage] : a.25.2.2 |Ferritin-like |Cobalamin adenosyltransferase-like |Cobalamin adenosyltransferase |automated matches |Bacillus halodurans [TaxId: 272558]
 d1aepa_ :     (ASN6)  (LYS158)   [view usage] : a.63.1.1 |Apolipophorin-III |Apolipophorin-III |Apolipophorin-III |Apolipophorin-III |Migratory locust (Locusta migratoria) [TaxId: 7004]
 d3ci1a_ :    (GLN53)  (GLN174)   [view usage] : a.25.2.0 |Ferritin-like |Cobalamin adenosyltransferase-like |automated matches |automated matches |Lactobacillus reuteri [TaxId: 1598]
 d3gaja_ :    (PRO26)  (GLN174)   [view usage] : a.25.2.0 |Ferritin-like |Cobalamin adenosyltransferase-like |automated matches |automated matches |Lactobacillus reuteri [TaxId: 1598]
 d2g2da_ :    (ASP30)  (ASN177)   [view usage] : a.25.2.0 |Ferritin-like |Cobalamin adenosyltransferase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d1yuzb1 :    (SER28)  (LEU157)   [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Nigerythrin, N-terminal domain |Desulfovibrio vulgaris [TaxId: 881]
 d2zhzc_ :    (ASP30)  (GLY171)   [view usage] : a.25.2.0 |Ferritin-like |Cobalamin adenosyltransferase-like |automated matches |automated matches |Burkholderia thailandensis [TaxId: 57975]
 d2zhzb_ :    (ASP30)  (GLY171)   [view usage] : a.25.2.0 |Ferritin-like |Cobalamin adenosyltransferase-like |automated matches |automated matches |Burkholderia thailandensis [TaxId: 57975]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.25,    a.63