Protein Concepts Dictionary

Tableau information

Concept source:  d2ihqa_  amino acid (a.a.) range (PRO671)(ASN758)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (PRO671)  (GLU681) H1
	  (SER696)  (LEU722) H2
	  (LEU722)  (LEU728) H3
	  (HIS729)  (TRP741) H4
	  (TRP741)  (ASN758) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
H2      143.3°   H2                          
H3       86.3°  -83.0°   H3                   
H4      -65.4°  144.9°  127.0°   H4            
H5      -85.1°  104.9° -171.2°  -47.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3l0ea_ :   (THR221)  (TYR320)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1m2zd_ :   (THR531)  (ARG614)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Glucocorticoid receptor |Human (Homo sapiens) [TaxId: 9606]
 d1faza_ :    (ASP43)   (THR97)   [view usage] : a.133.1.3 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Prokaryotic phospholipase A2 |Prokaryotic phospholipase A2 |Streptomyces violaceoruber [TaxId: 1935]
 d1a28b_ :   (PRO686)  (LYS769)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Progesterone receptor |Human (Homo sapiens) [TaxId: 9606]
 d3kbab_ :   (PRO686)  (SER772)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Progesterone receptor |Human (Homo sapiens) [TaxId: 9606]
 d3b5ra_ :   (PRO671)  (ASN758)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Androgen receptor |Human (Homo sapiens) [TaxId: 9606]
 d3g8ob_ :   (PRO686)  (LYS769)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2xhsa_ :   (PRO795)  (GLY886)   [view usage] : a.123.1.0 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d2aclb1 :   (SER205)  (ARG303)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Oxysterols receptor LXR-alpha |Mouse (Mus musculus) [TaxId: 10090]
 d2w8ya_ :   (PRO686)  (LYS769)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4csja_ :   (THR531)  (GLN615)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1pdua_ :   (SER321)  (ARG407)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear hormone receptor HR38 |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d3gn8a_ :     (LEU1)   (LYS83)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.123,   a.133