Tableau information
Concept source: d1pjia1 amino acid (a.a.) range (GLU142)(GLY215)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU142) (SER152) H1
(ILE156) (GLU162) H2
(GLY170) (LYS182) H3
(GLU194) (GLU206) H4
(LEU208) (GLY215) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 129.7° H2
H3 -90.8° 133.3° H3
H4 123.8° -45.0° 134.9° H4
H5 122.6° -53.9° 128.1° 9.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1kfvb1 : (GLU142) (GLY215) [view usage] : a.156.1.2 |S13-like H2TH domain |S13-like H2TH domain |Middle domain of MutM-like DNA repair proteins |DNA repair protein MutM (Fpg) |Lactococcus lactis [TaxId: 1358]
d1dvia_ : (TRP176) (SER270) [view usage] : a.39.1.8 |EF Hand-like |EF-hand |Penta-EF-hand proteins |Calpain small (regulatory) subunit (domain VI) |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1ddba_ : (LEU105) (GLU193) [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |Proapoptotic molecule Bid |Mouse (Mus musculus) [TaxId: 10090]
d4iveb_ : (THR541) (GLN610) [view usage] : a.144.1.1 |PABP domain-like |PABC (PABP) domain |PABC (PABP) domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4ivea_ : (THR541) (GLN610) [view usage] : a.144.1.1 |PABP domain-like |PABC (PABP) domain |PABC (PABP) domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3nxaa_ : (THR6) (GLN100) [view usage] : a.39.1.0 |EF Hand-like |EF-hand |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3kurd_ : (SER548) (GLN615) [view usage] : a.144.1.1 |PABP domain-like |PABC (PABP) domain |PABC (PABP) domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1pjja1 : (GLU142) (GLY215) [view usage] : a.156.1.2 |S13-like H2TH domain |S13-like H2TH domain |Middle domain of MutM-like DNA repair proteins |DNA repair protein MutM (Fpg) |Lactococcus lactis [TaxId: 1358]
d1kfva1 : (GLU142) (GLY215) [view usage] : a.156.1.2 |S13-like H2TH domain |S13-like H2TH domain |Middle domain of MutM-like DNA repair proteins |DNA repair protein MutM (Fpg) |Lactococcus lactis [TaxId: 1358]
d2jc2a_ : (PHE92) (VAL198) [view usage] : a.39.1.8 |EF Hand-like |EF-hand |Penta-EF-hand proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1pm5a1 : (GLU142) (GLY215) [view usage] : a.156.1.2 |S13-like H2TH domain |S13-like H2TH domain |Middle domain of MutM-like DNA repair proteins |DNA repair protein MutM (Fpg) |Lactococcus lactis [TaxId: 1358]
d3gppa2 : (SER144) (MET216) [view usage] : a.156.1.2 |S13-like H2TH domain |S13-like H2TH domain |Middle domain of MutM-like DNA repair proteins |DNA repair protein MutM (Fpg) |Bacillus stearothermophilus [TaxId: 1422]
d1pjia1 : (GLU142) (GLY215) [view usage] : a.156.1.2 |S13-like H2TH domain |S13-like H2TH domain |Middle domain of MutM-like DNA repair proteins |DNA repair protein MutM (Fpg) |Lactococcus lactis [TaxId: 1358]
d3kura_ : (THR546) (GLN615) [view usage] : a.144.1.1 |PABP domain-like |PABC (PABP) domain |PABC (PABP) domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1aj5a_ : (TRP170) (SER270) [view usage] : a.39.1.8 |EF Hand-like |EF-hand |Penta-EF-hand proteins |Calpain small (regulatory) subunit (domain VI) |Norway rat (Rattus norvegicus) [TaxId: 10116]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.39, f.1, a.156, a.144