Tableau information
Concept source: d4f01b2 amino acid (a.a.) range (ASP510)(GLN604)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP510) (ASN522) H1
(ALA523) (GLY554) H2
(PRO558) (LEU576) H3
(LYS581) (SER595) H4
(SER595) (GLN604) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -66.6° H2
H3 131.0° -156.9° H3
H4 -57.7° 23.4° -169.8° H4
H5 -119.2° 66.1° -106.4° -63.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1w36b2 : (SER586) (LYS654) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Exodeoxyribonuclease V beta chain (RecB), N-terminal domain |Escherichia coli [TaxId: 562]
d1fupa_ : (ASN263) (ILE391) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Fumarase |Escherichia coli [TaxId: 562]
d1k1wa1 : (TRP313) (LEU384) [view usage] : a.8.3.2 |immunoglobulin/albumin-binding domain-like |Families 57/38 glycoside transferase middle domain |4-alpha-glucanotransferase, domain 2 |4-alpha-glucanotransferase, domain 2 |Thermococcus litoralis [TaxId: 2265]
d3u95a2 : (THR401) (GLU468) [view usage] : d.162.1.2 |LDH C-terminal domain-like |LDH C-terminal domain-like |AglA-like glucosidase |automated matches |Thermotoga neapolitana [TaxId: 309803]
d2piha1 : (LYS6) (SER120) [view usage] : a.281.1.1 |YheA-like |YheA/YmcA-like |YmcA-like |Uncharacterized protein YmcA |Bacillus subtilis [TaxId: 1423]
d4r5jc2 : (GLU509) (ALA607) [view usage] : a.8.4.1 |immunoglobulin/albumin-binding domain-like |Heat shock protein 70kD (HSP70), C-terminal subdomain |Heat shock protein 70kD (HSP70), C-terminal subdomain |automated matches |Escherichia coli [TaxId: 83333]
d3hvta2 : (GLU194) (LEU310) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
d1puua_ : (GLY131) (SER209) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Mistletoe lectin I A-chain |European mistletoe (Viscum album) [TaxId: 3972]
d1aora1 : (LYS214) (LYS280) [view usage] : a.110.1.1 |Aldehyde ferredoxin oxidoreductase, C-terminal domains |Aldehyde ferredoxin oxidoreductase, C-terminal domains |Aldehyde ferredoxin oxidoreductase, C-terminal domains |Aldehyde ferredoxin oxidoreductase |Pyrococcus furiosus [TaxId: 2261]
d1fura_ : (ASN263) (ILE391) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Fumarase |Escherichia coli [TaxId: 562]
d1dkya1 : (ASN508) (LEU598) [view usage] : a.8.4.1 |immunoglobulin/albumin-binding domain-like |Heat shock protein 70kD (HSP70), C-terminal subdomain |Heat shock protein 70kD (HSP70), C-terminal subdomain |DnaK |Escherichia coli [TaxId: 562]
d1vjta2 : (THR401) (LYS468) [view usage] : d.162.1.2 |LDH C-terminal domain-like |LDH C-terminal domain-like |AglA-like glucosidase |Putative alpha-glucosidase TM0752 |Thermotoga maritima [TaxId: 2336]
d4f01a2 : (ASN508) (ALA602) [view usage] : a.8.4.1 |immunoglobulin/albumin-binding domain-like |Heat shock protein 70kD (HSP70), C-terminal subdomain |Heat shock protein 70kD (HSP70), C-terminal subdomain |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1dkza1 : (ASP510) (ILE601) [view usage] : a.8.4.1 |immunoglobulin/albumin-binding domain-like |Heat shock protein 70kD (HSP70), C-terminal subdomain |Heat shock protein 70kD (HSP70), C-terminal subdomain |DnaK |Escherichia coli [TaxId: 562]
d1ow6b_ : (ARG919) (GLY1047) [view usage] : a.24.14.1 |Four-helical up-and-down bundle |FAT domain of focal adhesion kinase |FAT domain of focal adhesion kinase |FAT domain of focal adhesion kinase |Human (Homo sapiens) [TaxId: 9606]
d2jr5a_ : (THR3) (LEU87) [view usage] : a.218.1.0 |YgfY-like |YgfY-like |automated matches |automated matches |Vibrio cholerae [TaxId: 666]
d4r5kb2 : (GLU509) (ALA607) [view usage] : a.8.4.1 |immunoglobulin/albumin-binding domain-like |Heat shock protein 70kD (HSP70), C-terminal subdomain |Heat shock protein 70kD (HSP70), C-terminal subdomain |automated matches |Escherichia coli [TaxId: 83333]
d3u95b2 : (THR401) (GLU468) [view usage] : d.162.1.2 |LDH C-terminal domain-like |LDH C-terminal domain-like |AglA-like glucosidase |automated matches |Thermotoga neapolitana [TaxId: 309803]
d2onga1 : (ASP69) (HIS141) [view usage] : a.102.4.0 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |automated matches |automated matches |Mentha spicata [TaxId: 29719]
d4o8ma_ : (SER72) (ASP137) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Actinobacillus succinogenes [TaxId: 339671]
d4o8mg_ : (SER72) (ASP137) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Actinobacillus succinogenes [TaxId: 339671]
d4r5jb2 : (ASN508) (GLN605) [view usage] : a.8.4.1 |immunoglobulin/albumin-binding domain-like |Heat shock protein 70kD (HSP70), C-terminal subdomain |Heat shock protein 70kD (HSP70), C-terminal subdomain |automated matches |Escherichia coli [TaxId: 83333]
d4eb2a_ : (GLY131) (SER209) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |automated matches |European mistletoe (Viscum album) [TaxId: 3972]
d4hx3a_ : (ASP68) (GLY132) [view usage] : d.92.1.1 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Zinc protease |automated matches |Streptomyces caespitosus [TaxId: 53502]
d3ir4a2 : (SER132) (GLN204) [view usage] : a.45.1.1 |GST C-terminal domain-like |GST C-terminal domain-like |Glutathione S-transferase (GST), C-terminal domain |automated matches |Salmonella enterica [TaxId: 99287]
d4pf8a_ : (GLN71) (GLY135) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Sulfitobacter sp. [TaxId: 314267]
d1xx7a_ : (TYR102) (ARG171) [view usage] : a.211.1.1 |HD-domain/PDEase-like |HD-domain/PDEase-like |HD domain |Oxetanocin-like protein PF0395 |Pyrococcus furiosus [TaxId: 2261]
d1fuoa_ : (ASN263) (ILE391) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Fumarase |Escherichia coli [TaxId: 562]
d4o8md_ : (SER72) (ASP137) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Actinobacillus succinogenes [TaxId: 339671]
d1hcya1 : (GLY50) (ILE132) [view usage] : a.85.1.1 |Hemocyanin, N-terminal domain |Hemocyanin, N-terminal domain |Hemocyanin, N-terminal domain |Hemocyanin, N-terminal domain |Spiny lobster (Panulirus interruptus) [TaxId: 6735]
d1dkxa1 : (GLU509) (ALA607) [view usage] : a.8.4.1 |immunoglobulin/albumin-binding domain-like |Heat shock protein 70kD (HSP70), C-terminal subdomain |Heat shock protein 70kD (HSP70), C-terminal subdomain |DnaK |Escherichia coli [TaxId: 562]
d4hx3g_ : (ASP68) (GLY132) [view usage] : d.92.1.1 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Zinc protease |automated matches |Streptomyces caespitosus [TaxId: 53502]
d4f01b2 : (ASP510) (GLN604) [view usage] : a.8.4.1 |immunoglobulin/albumin-binding domain-like |Heat shock protein 70kD (HSP70), C-terminal subdomain |Heat shock protein 70kD (HSP70), C-terminal subdomain |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1q5za_ : (SER530) (HIS612) [view usage] : a.196.1.1 |Invasion protein A (SipA) , C-terminal actin binding domain |Invasion protein A (SipA) , C-terminal actin binding domain |Invasion protein A (SipA) , C-terminal actin binding domain |Invasion protein A (SipA) , C-terminal actin binding domain |Salmonella typhimurium [TaxId: 90371]
d4r5ld2 : (ASP510) (GLN605) [view usage] : a.8.4.1 |immunoglobulin/albumin-binding domain-like |Heat shock protein 70kD (HSP70), C-terminal subdomain |Heat shock protein 70kD (HSP70), C-terminal subdomain |automated matches |Escherichia coli [TaxId: 83333]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.94, a.102, d.92, d.165, a.127, a.211, c.37, d.162, a.45, a.24, a.8, a.281, a.110, a.218, a.85, a.196