Protein Concepts Dictionary

Tableau information

Concept source:  d2hyfb2  amino acid (a.a.) range (THR63)(GLN134)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (THR63)   (GLY88) H1
	   (TYR95)  (ILE101) H2
	  (ILE101)  (LEU105) H3
	  (SER106)  (ASP124) H4
	  (ASP124)  (GLN134) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
H2      131.9°   H2                          
H3      114.7°  -41.0°   H3                   
H4       50.6° -147.0° -106.0°   H4            
H5      -56.5°   99.9°  125.0° -102.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.9°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2ev6a2 :    (THR63)  (HIS139)   [view usage] : a.76.1.1 |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Manganese transport regulator MntR |Bacillus subtilis [TaxId: 1423]
 d1on1a2 :    (THR63)  (LYS136)   [view usage] : a.76.1.1 |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Manganese transport regulator MntR |Bacillus subtilis [TaxId: 1423]
 d1u8ra2 :    (THR65)  (GLY139)   [view usage] : a.76.1.1 |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Iron-dependent regulator |Mycobacterium tuberculosis [TaxId: 1773]
 d2apla1 :    (GLN68)  (ASN145)   [view usage] : a.258.1.1 |PG0816-like |PG0816-like |PG0816-like |Hypothetical protein PG0816 |Porphyromonas gingivalis [TaxId: 837]
 d2ev5a2 :    (THR63)  (GLU138)   [view usage] : a.76.1.1 |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Manganese transport regulator MntR |Bacillus subtilis [TaxId: 1423]
 d2ev6b2 :    (THR63)  (GLU138)   [view usage] : a.76.1.1 |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Manganese transport regulator MntR |Bacillus subtilis [TaxId: 1423]
 d2hyfb2 :    (THR63)  (GLN134)   [view usage] : a.76.1.1 |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Manganese transport regulator MntR |Bacillus subtilis [TaxId: 1423]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.76,   a.258