Protein Concepts Dictionary

Tableau information

Concept source:  d3nsib_  amino acid (a.a.) range (ARG3)(CYS93)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ARG3)   (CYS23) H1
	   (CYS30)   (ALA43) H2
	   (GLU52)   (THR64) H3
	   (ASP71)   (TYR85) H4
	   (HIS87)   (CYS93) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
H2      134.9°   H2                          
H3      -33.5° -136.4°   H3                   
H4      121.0°  -41.7° -151.3°   H4            
H5      -95.0° -112.5°  110.7°  -77.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2j07a1 :   (GLY206)  (PHE273)   [view usage] : a.99.1.1 |Cryptochrome/photolyase FAD-binding domain |Cryptochrome/photolyase FAD-binding domain |Cryptochrome/photolyase FAD-binding domain |C-terminal domain of DNA photolyase |Thermus thermophilus [TaxId: 274]
 d3nskb1 :     (ARG3)   (CYS93)   [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3nsob1 :     (ARG3)   (CYS93)   [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3nsia_ :     (PRO4)   (CYS93)   [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3nsla_ :     (ARG3)   (CYS93)   [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ksoa_ :     (ARG3)   (CYS93)   [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |Calcyclin (S100) |Human (Homo sapiens), s100a3 [TaxId: 9606]
 d2rgia_ :     (SER3)   (SER93)   [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3nska1 :     (ARG3)   (CYS93)   [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3nsib_ :     (ARG3)   (CYS93)   [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.39,    a.99