Tableau information
Concept source: d2ofyb_ amino acid (a.a.) range (THR7)(GLY81)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR7) (GLY26) H1
(SER29) (ALA37) H2
(SER40) (GLY50) H3
(ALA56) (LEU67) H4
(LEU71) (GLY81) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 107.9° H2
H3 -116.3° 106.5° H3
H4 27.1° 118.8° -89.2° H4
H5 134.9° -116.9° 46.3° 116.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4mcta_ : (PRO9) (GLU80) [view usage] : a.35.1.3 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |SinR domain-like |Antitoxin HigA |Proteus vulgaris [TaxId: 585]
d2axub1 : (ILE4) (ALA65) [view usage] : a.35.1.11 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |PrgX N-terminal domain-like |PrgX |Enterococcus faecalis [TaxId: 1351]
d2awic1 : (ILE4) (GLY66) [view usage] : a.35.1.11 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |PrgX N-terminal domain-like |PrgX |Enterococcus faecalis [TaxId: 1351]
d2o49a_ : (ILE375) (ARG453) [view usage] : a.35.1.7 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |CUT domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4mcxc_ : (PRO9) (LEU79) [view usage] : a.35.1.3 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |SinR domain-like |Antitoxin HigA |Proteus vulgaris [TaxId: 585]
d1adra_ : (LEU5) (LYS66) [view usage] : a.35.1.2 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |Phage repressors |P22 C2 repressor, DNA-binding domain |Salmonella bacteriophage P22 [TaxId: 10754]
d2ebya_ : (THR17) (ASN92) [view usage] : a.35.1.0 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |automated matches |automated matches |Escherichia coli [TaxId: 562]
d2ebyb_ : (THR17) (ASN92) [view usage] : a.35.1.0 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |automated matches |automated matches |Escherichia coli [TaxId: 562]
d3cror_ : (THR1) (TYR61) [view usage] : a.35.1.2 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |Phage repressors |cro 434 |Bacteriophage 434 [TaxId: 10712]
d1b0na2 : (ILE2) (LEU62) [view usage] : a.35.1.3 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |SinR domain-like |SinR repressor, DNA-binding domain |Bacillus subtilis [TaxId: 1423]
d3kz3a_ : (GLN8) (ARG84) [view usage] : a.35.1.2 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |Phage repressors |lambda C1 repressor, DNA-binding domain |Bacteriophage lambda [TaxId: 10710]
d2kisa_ : (LEU618) (LYS680) [view usage] : a.159.2.1 |Another 3-helical bundle |FF domain |FF domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2axva1 : (ILE4) (ALA65) [view usage] : a.35.1.0 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |automated matches |automated matches |Enterococcus faecalis [TaxId: 1351]
d2axua1 : (ILE4) (GLY66) [view usage] : a.35.1.11 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |PrgX N-terminal domain-like |PrgX |Enterococcus faecalis [TaxId: 1351]
d2axza1 : (ILE4) (GLY66) [view usage] : a.35.1.0 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |automated matches |automated matches |Enterococcus faecalis [TaxId: 1351]
d2d5va1 : (ASN5) (LEU79) [view usage] : a.35.1.7 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |CUT domain |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2csfa1 : (ALA21) (SER95) [view usage] : a.35.1.7 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |CUT domain |DNA-binding protein SATB2 |Human (Homo sapiens) [TaxId: 9606]
d3crol_ : (LEU2) (GLN60) [view usage] : a.35.1.2 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |Phage repressors |cro 434 |Bacteriophage 434 [TaxId: 10712]
d2iu7a1 : (ASN9) (LEU75) [view usage] : a.35.1.4 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |Cyanase N-terminal domain |automated matches |Escherichia coli [TaxId: 562]
d2axuc1 : (ILE4) (ALA65) [view usage] : a.35.1.11 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |PrgX N-terminal domain-like |PrgX |Enterococcus faecalis [TaxId: 1351]
d1riob_ : (THR9) (PRO79) [view usage] : a.35.1.2 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |Phage repressors |lambda C1 repressor, DNA-binding domain |Bacteriophage lambda [TaxId: 10710]
d3jxbc_ : (MET6) (LEU65) [view usage] : a.35.1.2 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |Phage repressors |P22 C2 repressor, DNA-binding domain |Salmonella bacteriophage P22 [TaxId: 10754]
d2awig1 : (ILE4) (GLY66) [view usage] : a.35.1.11 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |PrgX N-terminal domain-like |PrgX |Enterococcus faecalis [TaxId: 1351]
d1wiza_ : (ASP21) (SER96) [view usage] : a.35.1.7 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |CUT domain |DNA-binding protein SATB2 |Human (Homo sapiens) [TaxId: 9606]
d1dw9a1 : (ASN9) (LEU75) [view usage] : a.35.1.4 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |Cyanase N-terminal domain |Cyanase N-terminal domain |Escherichia coli [TaxId: 562]
d4mctc_ : (PRO9) (LEU79) [view usage] : a.35.1.3 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |SinR domain-like |Antitoxin HigA |Proteus vulgaris [TaxId: 585]
d2ofya1 : (THR7) (ALA76) [view usage] : a.35.1.3 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |SinR domain-like |Putative transcriptional regulator RHA1_ro04071 |Rhodococcus sp. RHA1 [TaxId: 101510]
d2aw6a1 : (ILE4) (GLY66) [view usage] : a.35.1.11 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |PrgX N-terminal domain-like |PrgX |Enterococcus faecalis [TaxId: 1351]
d4mcxa_ : (PRO9) (GLU80) [view usage] : a.35.1.3 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |SinR domain-like |Antitoxin HigA |Proteus vulgaris [TaxId: 585]
d1x57a1 : (LEU12) (LYS76) [view usage] : a.35.1.12 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |EDF1-like |Endothelial differentiation-related factor 1, EDF1 |Human (Homo sapiens) [TaxId: 9606]
d3jxbd_ : (MET6) (LEU65) [view usage] : a.35.1.2 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |Phage repressors |P22 C2 repressor, DNA-binding domain |Salmonella bacteriophage P22 [TaxId: 10754]
d2icpa1 : (PRO9) (VAL83) [view usage] : a.35.1.3 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |SinR domain-like |Antitoxin HigA |Escherichia coli [TaxId: 562]
d1praa_ : (SER1) (LEU60) [view usage] : a.35.1.2 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |Phage repressors |434 C1 repressor, DNA-binding domain |Bacteriophage 434 [TaxId: 10712]
d2awia1 : (ILE4) (ALA65) [view usage] : a.35.1.11 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |PrgX N-terminal domain-like |PrgX |Enterococcus faecalis [TaxId: 1351]
d2r1jl_ : (MET6) (LEU65) [view usage] : a.35.1.2 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |Phage repressors |P22 C2 repressor, DNA-binding domain |Salmonella bacteriophage P22 [TaxId: 10754]
d1rioa_ : (THR9) (PRO79) [view usage] : a.35.1.2 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |Phage repressors |lambda C1 repressor, DNA-binding domain |Bacteriophage lambda [TaxId: 10710]
d2aw6b1 : (ILE4) (GLY66) [view usage] : a.35.1.0 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |automated matches |automated matches |Enterococcus faecalis [TaxId: 1351]
d2r63a_ : (SER1) (LEU60) [view usage] : a.35.1.2 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |Phage repressors |434 C1 repressor, DNA-binding domain |Bacteriophage 434 [TaxId: 10712]
d2axuj1 : (GLY5) (GLY66) [view usage] : a.35.1.11 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |PrgX N-terminal domain-like |PrgX |Enterococcus faecalis [TaxId: 1351]
d2ofyb_ : (THR7) (GLY81) [view usage] : a.35.1.3 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |SinR domain-like |Putative transcriptional regulator RHA1_ro04071 |Rhodococcus sp. RHA1 [TaxId: 101510]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.35, a.159