Protein Concepts Dictionary

Tableau information

Concept source:  d3g3na_  amino acid (a.a.) range (THR369)(LEU454)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (THR369)  (TYR394) H1
	  (ASP403)  (GLU407) H2
	  (SER408)  (THR418) H3
	  (THR418)  (ASN433) H4
	  (ARG435)  (LEU454) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
H2      138.1°   H2                          
H3      112.6°   74.9°   H3                   
H4      140.5°  -67.9°  -34.2°   H4            
H5      -57.1°  -94.7° -149.5° -161.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3ecma_ :   (LEU734)  (LEU816)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4d09a_ :   (TRP816)  (ILE904)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4c1ic_ :   (TRP816)  (VAL898)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4d08d1 :   (TRP816)  (ILE904)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2hd1a_ :   (MET410)  (GLU502)   [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |High-affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, PDE9A |Human (Homo sapiens) [TaxId: 9606]
 d2h42a_ :   (TRP772)  (LYS852)   [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |cGMP-specific 3',5'-cyclic phosphodiesterase pde5a1-Ibmx |Human (Homo sapiens) [TaxId: 9606]
 d4c1ib_ :   (TRP816)  (SER899)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4ddlb_ :   (TRP672)  (GLY758)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2oupb_ :   (ALA694)  (GLY768)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2ounb_ :   (ALA694)  (GLY768)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3itua_ :   (TRP816)  (ILE904)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.211