Tableau information
Concept source: d4n5fa1 amino acid (a.a.) range (THR6)(GLY100)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR6) (ALA28) H1
(ALA28) (ASP34) H2
(ASP39) (GLY49) H3
(TYR66) (ASP80) H4
(ALA81) (GLY100) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 56.3° H2
H3 170.2° -131.9° H3
H4 -17.1° -71.9° 156.2° H4
H5 131.4° 79.6° -54.0° 148.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4djnb_ : (THR182) (GLY298) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2jbwa1 : (LYS8) (TRP86) [view usage] : c.69.1.41 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |2,6-dihydropseudooxynicotine hydrolase-like |2,6-dihydropseudooxynicotine hydrolase |Arthrobacter nicotinovorans [TaxId: 29320]
d2mala_ : (CYS4) (GLY75) [view usage] : a.52.1.0 |Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |automated matches |automated matches |Common lentil (Lens culinaris) [TaxId: 3864]
d4pxhd_ : (ASN10) (LEU77) [view usage] : a.28.1.0 |Acyl carrier protein-like |ACP-like |automated matches |automated matches |Streptomyces sp. [TaxId: 1001349]
d4bmqa_ : (THR146) (LEU268) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Bacillus cereus [TaxId: 1396]
d2cx9a2 : (PRO17) (ASN93) [view usage] : e.6.1.1 |Acyl-CoA dehydrogenase NM domain-like |Acyl-CoA dehydrogenase NM domain-like |Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains |Acyl-CoA dehydrogenase |Thermus thermophilus [TaxId: 274]
d2jifb1 : (THR58) (LYS152) [view usage] : e.6.1.0 |Acyl-CoA dehydrogenase NM domain-like |Acyl-CoA dehydrogenase NM domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2k92a_ : (SER1) (GLN76) [view usage] : a.28.1.1 |Acyl carrier protein-like |ACP-like |Acyl-carrier protein (ACP) |Acyl carrier protein |Escherichia coli [TaxId: 562]
d2yvya1 : (SER65) (TYR129) [view usage] : a.118.26.0 |alpha-alpha superhelix |MgtE N-terminal domain-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d2dvla1 : (THR4) (GLY100) [view usage] : e.6.1.0 |Acyl-CoA dehydrogenase NM domain-like |Acyl-CoA dehydrogenase NM domain-like |automated matches |automated matches |Thermus thermophilus [TaxId: 300852]
d4oj7e_ : (THR37) (VAL151) [view usage] : a.130.1.0 |Chorismate mutase II |Chorismate mutase II |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
d1h0na_ : (THR221) (GLY337) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Mouse (Mus musculus) [TaxId: 10090]
d2viga1 : (PRO35) (LYS129) [view usage] : e.6.1.1 |Acyl-CoA dehydrogenase NM domain-like |Acyl-CoA dehydrogenase NM domain-like |Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3swob1 : (GLN26) (TYR117) [view usage] : e.6.1.0 |Acyl-CoA dehydrogenase NM domain-like |Acyl-CoA dehydrogenase NM domain-like |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d4oj7b_ : (ASP33) (VAL151) [view usage] : a.130.1.0 |Chorismate mutase II |Chorismate mutase II |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
d1jk0a_ : (LEU227) (GLY343) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Baker's yeast (Saccharomyces cerevisiae), Y2 [TaxId: 4932]
d3gqtc1 : (LEU37) (GLU113) [view usage] : e.6.1.0 |Acyl-CoA dehydrogenase NM domain-like |Acyl-CoA dehydrogenase NM domain-like |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 320372]
d3tp0a2 : (ARG99) (GLY213) [view usage] : a.121.1.1 |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Ethr repressor |Mycobacterium tuberculosis [TaxId: 1773]
d2iu5b2 : (TRP75) (GLU179) [view usage] : a.121.1.1 |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Transcriptional activator DhaS |Lactococcus lactis [TaxId: 1358]
d1be2a_ : (CYS3) (ASN74) [view usage] : a.52.1.1 |Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |Plant lipid-transfer and hydrophobic proteins |Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) |Barley (Hordeum vulgare) [TaxId: 4513]
d2peie_ : (LYS4) (ARG108) [view usage] : a.280.1.1 |RbcX-like |RbcX-like |RbcX-like |RuBisCo chaperone RbcX |Synechococcus sp. pcc 7002 [TaxId: 32049]
d2jifa1 : (THR58) (ASN143) [view usage] : e.6.1.0 |Acyl-CoA dehydrogenase NM domain-like |Acyl-CoA dehydrogenase NM domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1u9na2 : (ASP98) (GLY213) [view usage] : a.121.1.1 |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Ethr repressor |Mycobacterium tuberculosis [TaxId: 1773]
d3r7kc1 : (THR26) (THR111) [view usage] : e.6.1.0 |Acyl-CoA dehydrogenase NM domain-like |Acyl-CoA dehydrogenase NM domain-like |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
d1jqia2 : (PRO11) (LYS105) [view usage] : e.6.1.1 |Acyl-CoA dehydrogenase NM domain-like |Acyl-CoA dehydrogenase NM domain-like |Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains |Butyryl-CoA dehydrogenase, NM domains |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2fp2b_ : (GLU41) (SER150) [view usage] : a.130.1.4 |Chorismate mutase II |Chorismate mutase II |Secreted chorismate mutase-like |Secreted chorismate mutase |Mycobacterium tuberculosis [TaxId: 1773]
d1xsza1 : (HIS2) (SER64) [view usage] : a.118.3.1 |alpha-alpha superhelix |Sec7 domain |Sec7 domain |RalF, N-terminal domain |Legionella pneumophila [TaxId: 446]
d4oj7c_ : (ASP35) (VAL151) [view usage] : a.130.1.0 |Chorismate mutase II |Chorismate mutase II |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.69, a.118, e.6, a.25, a.28, a.280, a.130, a.52, a.121