Tableau information
Concept source: d2bnoa1 amino acid (a.a.) range (THR4)(GLY64)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR4) (LYS23) H1
(ASP25) (GLY34) H2
(PRO37) (GLY46) H3
(GLY46) (LEU51) H4
(THR52) (GLY64) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 107.6° H2
H3 -125.4° 107.1° H3
H4 104.5° 7.9° -104.2° H4
H5 22.3° 124.2° -103.7° 119.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3scha1 : (SER8) (GLY64) [view usage] : a.35.1.3 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |SinR domain-like |Hydroxypropylphosphonic acid epoxidase Fom4, N-terminal domain |Streptomyces wedmorensis [TaxId: 43759]
d2bnoa1 : (THR4) (GLY64) [view usage] : a.35.1.3 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |SinR domain-like |Hydroxypropylphosphonic acid epoxidase Fom4, N-terminal domain |Streptomyces wedmorensis [TaxId: 43759]
d1octc2 : (GLU7) (GLU75) [view usage] : a.35.1.1 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |POU-specific domain |Oct-1 |Human (Homo sapiens) [TaxId: 9606]
d1zzca1 : (THR6) (GLY64) [view usage] : a.35.1.3 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |SinR domain-like |Hydroxypropylphosphonic acid epoxidase Fom4, N-terminal domain |Streptomyces wedmorensis [TaxId: 43759]
d3schb1 : (SER8) (GLY64) [view usage] : a.35.1.3 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |SinR domain-like |Hydroxypropylphosphonic acid epoxidase Fom4, N-terminal domain |Streptomyces wedmorensis [TaxId: 43759]
d2xsdc1 : (SER249) (THR318) [view usage] : a.35.1.0 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2a6cb_ : (MSE1) (SER58) [view usage] : a.35.1.13 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |NE1354 |HTH-motif protein NE1354 |Nitrosomonas europaea [TaxId: 915]
d2a6ca1 : (MSE1) (GLY60) [view usage] : a.35.1.13 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |NE1354 |HTH-motif protein NE1354 |Nitrosomonas europaea [TaxId: 915]
d1zz6a1 : (THR6) (GLY64) [view usage] : a.35.1.3 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |SinR domain-like |Hydroxypropylphosphonic acid epoxidase Fom4, N-terminal domain |Streptomyces wedmorensis [TaxId: 43759]
d2croa_ : (THR1) (GLU47) [view usage] : a.35.1.2 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |Phage repressors |cro 434 |Bacteriophage 434 [TaxId: 10712]
d1cqta2 : (LEU6) (LEU71) [view usage] : a.35.1.1 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |POU-specific domain |Oct-1 |Human (Homo sapiens) [TaxId: 9606]
d1zz7a1 : (SER8) (GLY64) [view usage] : a.35.1.3 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |SinR domain-like |Hydroxypropylphosphonic acid epoxidase Fom4, N-terminal domain |Streptomyces wedmorensis [TaxId: 43759]
d1hf0a2 : (LEU6) (GLU75) [view usage] : a.35.1.1 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |POU-specific domain |Oct-1 |Human (Homo sapiens) [TaxId: 9606]
d1al04_ : (ARG10) (VAL86) [view usage] : a.84.1.1 |Scaffolding protein gpD of bacteriophage procapsid |Scaffolding protein gpD of bacteriophage procapsid |Scaffolding protein gpD of bacteriophage procapsid |Scaffolding protein gpD of bacteriophage procapsid |Bacteriophage phi-X174 [TaxId: 10847]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.35, a.84