Tableau information
Concept source: d2p66a1 amino acid (a.a.) range (ASN12)(ASP91)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASN12) (GLN31) H1
(ILE33) (TYR49) H2
(SER55) (LYS61) H3
(THR67) (GLY80) H4
(LEU82) (ASP91) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -167.4° H2
H3 -74.0° 95.4° H3
H4 125.2° -59.9° 142.1° H4
H5 52.1° -123.1° 91.8° -81.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3v7la1 : (GLY13) (ASP91) [view usage] : a.60.6.1 |SAM domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase beta, N-terminal (8 kD)-domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4i28a1 : (GLN166) (ASN242) [view usage] : a.60.6.0 |SAM domain-like |DNA polymerase beta, N-terminal domain-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1bpya1 : (ASN12) (ASP91) [view usage] : a.60.6.1 |SAM domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase beta, N-terminal (8 kD)-domain |Human (Homo sapiens) [TaxId: 9606]
d2p66a1 : (ASN12) (ASP91) [view usage] : a.60.6.1 |SAM domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase beta, N-terminal (8 kD)-domain |Human (Homo sapiens) [TaxId: 9606]
d1bpxa1 : (GLY13) (ASP91) [view usage] : a.60.6.1 |SAM domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase beta, N-terminal (8 kD)-domain |Human (Homo sapiens) [TaxId: 9606]
d1xsna1 : (LEU254) (HIS327) [view usage] : a.60.6.1 |SAM domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase lambda |Human (Homo sapiens) [TaxId: 9606]
d1xsle1 : (LEU254) (HIS327) [view usage] : a.60.6.1 |SAM domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase lambda |Human (Homo sapiens) [TaxId: 9606]
d3f5ca_ : (PRO321) (LEU388) [view usage] : a.123.1.0 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2ihma1 : (THR154) (CYS230) [view usage] : a.60.6.0 |SAM domain-like |DNA polymerase beta, N-terminal domain-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1xsli1 : (ILE256) (HIS327) [view usage] : a.60.6.1 |SAM domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase lambda |Human (Homo sapiens) [TaxId: 9606]
d1bpda1 : (GLY13) (ASP91) [view usage] : a.60.6.1 |SAM domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase beta, N-terminal (8 kD)-domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2bcva1 : (LEU254) (ILE328) [view usage] : a.60.6.0 |SAM domain-like |DNA polymerase beta, N-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3v7ka1 : (GLY14) (ASP91) [view usage] : a.60.6.1 |SAM domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase beta, N-terminal (8 kD)-domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1jmsa1 : (ASN165) (ASN242) [view usage] : a.60.6.1 |SAM domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase beta, N-terminal domain-like |Terminal deoxynucleotidyl transferase |Mouse (Mus musculus) [TaxId: 10090]
d4klua1 : (ASN12) (ASP91) [view usage] : a.60.6.1 |SAM domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase beta, N-terminal (8 kD)-domain |Human (Homo sapiens) [TaxId: 9606]
d1zqaa1 : (GLY13) (ASP91) [view usage] : a.60.6.1 |SAM domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase beta, N-terminal (8 kD)-domain |Human (Homo sapiens) [TaxId: 9606]
d4klqa1 : (ASN12) (ASP91) [view usage] : a.60.6.1 |SAM domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase beta, N-terminal (8 kD)-domain |Human (Homo sapiens) [TaxId: 9606]
d4lzda1 : (ASN153) (ARG230) [view usage] : a.60.6.0 |SAM domain-like |DNA polymerase beta, N-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4i27a1 : (ASN165) (ASN242) [view usage] : a.60.6.0 |SAM domain-like |DNA polymerase beta, N-terminal domain-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1huoa1 : (GLY13) (ASP91) [view usage] : a.60.6.1 |SAM domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase beta, N-terminal (8 kD)-domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.123, a.60