Protein Concepts Dictionary

Tableau information

Concept source:  d1t39b1  amino acid (a.a.) range (SER93)(GLY173)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER93)  (LYS104) H1
	  (SER113)  (GLY122) H2
	  (ALA126)  (ASN137) H3
	  (PRO144)  (VAL149) H4
	  (LEU162)  (GLY173) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
H2      108.4°   H2                          
H3      -77.2°   93.3°   H3                   
H4       90.1°  114.8° -151.8°   H4            
H5       33.1°   79.3°   94.1°  -88.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1t39a1 :    (SER93)  (GLY173)   [view usage] : a.4.2.1 |DNA/RNA-binding 3-helical bundle |Methylated DNA-protein cysteine methyltransferase, C-terminal domain |Methylated DNA-protein cysteine methyltransferase, C-terminal domain |O6-alkylguanine-DNA alkyltransferase |Human (Homo sapiens) [TaxId: 9606]
 d1qnta1 :    (SER93)  (GLY173)   [view usage] : a.4.2.1 |DNA/RNA-binding 3-helical bundle |Methylated DNA-protein cysteine methyltransferase, C-terminal domain |Methylated DNA-protein cysteine methyltransferase, C-terminal domain |O6-alkylguanine-DNA alkyltransferase |Human (Homo sapiens) [TaxId: 9606]
 d1sfea1 :    (ALA95)  (GLU175)   [view usage] : a.4.2.1 |DNA/RNA-binding 3-helical bundle |Methylated DNA-protein cysteine methyltransferase, C-terminal domain |Methylated DNA-protein cysteine methyltransferase, C-terminal domain |Ada DNA repair protein |Escherichia coli [TaxId: 562]
 d1t39b1 :    (SER93)  (GLY173)   [view usage] : a.4.2.1 |DNA/RNA-binding 3-helical bundle |Methylated DNA-protein cysteine methyltransferase, C-terminal domain |Methylated DNA-protein cysteine methyltransferase, C-terminal domain |O6-alkylguanine-DNA alkyltransferase |Human (Homo sapiens) [TaxId: 9606]
 d1t38a1 :    (SER93)  (GLU172)   [view usage] : a.4.2.1 |DNA/RNA-binding 3-helical bundle |Methylated DNA-protein cysteine methyltransferase, C-terminal domain |Methylated DNA-protein cysteine methyltransferase, C-terminal domain |O6-alkylguanine-DNA alkyltransferase |Human (Homo sapiens) [TaxId: 9606]
 d1yfha1 :    (SER93)  (GLY173)   [view usage] : a.4.2.1 |DNA/RNA-binding 3-helical bundle |Methylated DNA-protein cysteine methyltransferase, C-terminal domain |Methylated DNA-protein cysteine methyltransferase, C-terminal domain |O6-alkylguanine-DNA alkyltransferase |Human (Homo sapiens) [TaxId: 9606]
 d3n1xb_ :   (GLY108)  (GLU194)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouE |Pseudomonas sp. [TaxId: 320855]
 d3kzza2 :    (SER93)  (GLY173)   [view usage] : a.4.2.0 |DNA/RNA-binding 3-helical bundle |Methylated DNA-protein cysteine methyltransferase, C-terminal domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1mgta1 :    (THR90)  (GLY168)   [view usage] : a.4.2.1 |DNA/RNA-binding 3-helical bundle |Methylated DNA-protein cysteine methyltransferase, C-terminal domain |Methylated DNA-protein cysteine methyltransferase, C-terminal domain |O6-alkylguanine-DNA alkyltransferase |Pyrococcus kodakaraensis [TaxId: 311400]
 d1eh6a1 :    (SER93)  (GLY173)   [view usage] : a.4.2.1 |DNA/RNA-binding 3-helical bundle |Methylated DNA-protein cysteine methyltransferase, C-terminal domain |Methylated DNA-protein cysteine methyltransferase, C-terminal domain |O6-alkylguanine-DNA alkyltransferase |Human (Homo sapiens) [TaxId: 9606]
 d3kzya2 :    (SER93)  (GLY173)   [view usage] : a.4.2.0 |DNA/RNA-binding 3-helical bundle |Methylated DNA-protein cysteine methyltransferase, C-terminal domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.25,     a.4