Tableau information
Concept source: d2buga1 amino acid (a.a.) range (ILE63)(LYS146)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ILE63) (GLU76) H1
(CYS77) (LEU91) H2
(TYR95) (GLY110) H3
(LYS111) (LYS126) H4
(ASP129) (LYS146) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -162.8° H2
H3 25.3° -153.0° H3
H4 -135.1° 37.5° -157.0° H4
H5 46.5° -128.2° 24.8° -148.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4u2md1 : (LYS39) (HIS109) [view usage] : d.42.1.1 |POZ domain |POZ domain |BTB/POZ domain |B-cell lymphoma 6 (Bcl6) protein BTB domain |Human (Homo sapiens) [TaxId: 9606]
d1hxia_ : (PRO352) (LEU444) [view usage] : a.118.8.1 |alpha-alpha superhelix |TPR-like |Tetratricopeptide repeat (TPR) |Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d2nxph_ : (SER199) (SER284) [view usage] : d.379.1.1 |Taf5 N-terminal domain-like |Taf5 N-terminal domain-like |Taf5 N-terminal domain-like |TAF5 subunit of TFIID |Human (Homo sapiens) [TaxId: 9606]
d2uuha1 : (ALA6) (LEU143) [view usage] : f.56.1.1 |MAPEG domain-like |MAPEG domain-like |MAPEG domain |Leukotriene C4 synthase |Human (Homo sapiens) [TaxId: 9606]
d2vyib_ : (ALA125) (LEU206) [view usage] : a.118.8.1 |alpha-alpha superhelix |TPR-like |Tetratricopeptide repeat (TPR) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3a3va_ : (PHE261) (GLY374) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |Xylanase Y |Bacillus halodurans [TaxId: 86665]
d2gh4a_ : (LEU14) (LEU122) [view usage] : a.102.1.6 |alpha/alpha toroid |Six-hairpin glycosidases |Hypothetical protein YteR |Hypothetical protein YteR |Bacillus subtilis [TaxId: 1423]
d3wc3a_ : (GLN249) (GLY359) [view usage] : a.102.1.0 |alpha/alpha toroid |Six-hairpin glycosidases |automated matches |automated matches |Worm (Eisenia fetida) [TaxId: 6396]
d2grmb2 : (LEU207) (ILE305) [view usage] : a.118.8.4 |alpha-alpha superhelix |TPR-like |PrgX C-terminal domain-like |automated matches |Enterococcus faecalis [TaxId: 1351]
d1oxja2 : (ARG656) (MET763) [view usage] : a.118.1.13 |alpha-alpha superhelix |ARM repeat |PHAT domain |RNA-binding protein Smaug |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d3pcva_ : (ALA6) (LEU146) [view usage] : f.56.1.1 |MAPEG domain-like |MAPEG domain-like |MAPEG domain |Leukotriene C4 synthase |Human (Homo sapiens) [TaxId: 9606]
d1v5ca_ : (TYR317) (GLY427) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |Chitosanase |Bacillus sp., strain k17 [TaxId: 1409]
d1wu6a1 : (PHE261) (GLY374) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |Xylanase Y |Bacillus halodurans [TaxId: 86665]
d2eb0b_ : (THR109) (ASN200) [view usage] : c.107.1.0 |DHH phosphoesterases |DHH phosphoesterases |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 243232]
d1iyga_ : (SER17) (GLN106) [view usage] : a.118.8.1 |alpha-alpha superhelix |TPR-like |Tetratricopeptide repeat (TPR) |Hypothetical protein RSGI Ruh-001 |Mouse (Mus musculus) [TaxId: 10090]
d1h12a_ : (GLU279) (GLY395) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |Endo-1,4-beta-xylanase |Pseudoalteromonas haloplanktis [TaxId: 228]
d3qt9a_ : (GLU71) (SER182) [view usage] : a.102.1.8 |alpha/alpha toroid |Six-hairpin glycosidases |CPF0428-like |Hypothetical protein CPF0428 |Clostridium perfringens [TaxId: 1502]
d1bpoa1 : (GLU331) (SER403) [view usage] : a.118.1.4 |alpha-alpha superhelix |ARM repeat |Clathrin heavy-chain linker domain |Clathrin heavy-chain linker domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1qqfa_ : (THR1021) (GLY1131) [view usage] : a.102.4.4 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Complement components |Thio-ester containing domain (TED) from Complement C3, aka C3d or C3dg |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1e96b_ : (LEU3) (GLU85) [view usage] : a.118.8.1 |alpha-alpha superhelix |TPR-like |Tetratricopeptide repeat (TPR) |Neutrophil cytosolic factor 2 (NCF-2, p67-phox) |Human (Homo sapiens) [TaxId: 9606]
d1ihga1 : (GLN269) (LYS362) [view usage] : a.118.8.1 |alpha-alpha superhelix |TPR-like |Tetratricopeptide repeat (TPR) |Cyclophilin 40 |Cow (Bos taurus) [TaxId: 9913]
d1bpob1 : (GLU331) (SER403) [view usage] : a.118.1.4 |alpha-alpha superhelix |ARM repeat |Clathrin heavy-chain linker domain |Clathrin heavy-chain linker domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2pqra_ : (TYR18) (THR102) [view usage] : a.118.8.1 |alpha-alpha superhelix |TPR-like |Tetratricopeptide repeat (TPR) |Mitochondria fission protein Fis1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1i5na_ : (ASP4) (LYS131) [view usage] : a.24.10.3 |Four-helical up-and-down bundle |Histidine-containing phosphotransfer domain, HPT domain |Chemotaxis protein CheA P1 domain |Chemotaxis protein CheA P1 domain |Salmonella typhimurium [TaxId: 90371]
d1i5nc_ : (TYR9) (GLU129) [view usage] : a.24.10.3 |Four-helical up-and-down bundle |Histidine-containing phosphotransfer domain, HPT domain |Chemotaxis protein CheA P1 domain |Chemotaxis protein CheA P1 domain |Salmonella typhimurium [TaxId: 90371]
d1tjca_ : (GLU148) (LYS237) [view usage] : a.118.8.1 |alpha-alpha superhelix |TPR-like |Tetratricopeptide repeat (TPR) |Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 |Human (Homo sapiens) [TaxId: 9606]
d1xwta1 : (GLU279) (GLY395) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |Endo-1,4-beta-xylanase |Pseudoalteromonas haloplanktis [TaxId: 228]
d1elwa_ : (GLU2) (ASN86) [view usage] : a.118.8.1 |alpha-alpha superhelix |TPR-like |Tetratricopeptide repeat (TPR) |Hop |Human (Homo sapiens) [TaxId: 9606]
d1nc5a_ : (LEU14) (LEU122) [view usage] : a.102.1.6 |alpha/alpha toroid |Six-hairpin glycosidases |Hypothetical protein YteR |Hypothetical protein YteR |Bacillus subtilis [TaxId: 1423]
d1hh8a_ : (SER2) (GLN83) [view usage] : a.118.8.1 |alpha-alpha superhelix |TPR-like |Tetratricopeptide repeat (TPR) |Neutrophil cytosolic factor 2 (NCF-2, p67-phox) |Human (Homo sapiens) [TaxId: 9606]
d3axyc_ : (LEU123) (THR233) [view usage] : a.118.7.1 |alpha-alpha superhelix |14-3-3 protein |14-3-3 protein |automated matches |Oryza sativa [TaxId: 39947]
d2v5fa_ : (THR146) (GLU238) [view usage] : a.118.8.1 |alpha-alpha superhelix |TPR-like |Tetratricopeptide repeat (TPR) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4gtoa_ : (GLY288) (SER368) [view usage] : a.118.6.1 |alpha-alpha superhelix |Protein prenylyltransferase |Protein prenylyltransferase |Protein farnesyltransferase alpha-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1vd5a_ : (THR220) (GLY367) [view usage] : a.102.1.7 |alpha/alpha toroid |Six-hairpin glycosidases |Glycosyl Hydrolase Family 88 |Unsaturated glucuronyl hydrolase |Bacillus sp. GL1 [TaxId: 84635]
d1h14a_ : (GLU279) (GLY395) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |Endo-1,4-beta-xylanase |Pseudoalteromonas haloplanktis [TaxId: 228]
d2zzra_ : (ALA246) (TYR391) [view usage] : a.102.1.0 |alpha/alpha toroid |Six-hairpin glycosidases |automated matches |automated matches |Streptococcus agalactiae [TaxId: 1311]
d2ijqb_ : (GLU28) (ASP128) [view usage] : a.246.2.1 |Hyaluronidase domain-like |TTHA0068-like |TTHA0068-like |automated matches |Haloarcula marismortui [TaxId: 2238]
d1xw2a1 : (GLU279) (GLY395) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |Endo-1,4-beta-xylanase |Pseudoalteromonas haloplanktis [TaxId: 228]
d3bu8a_ : (GLU94) (GLU201) [view usage] : a.146.1.1 |Telomeric repeat binding factor (TRF) dimerisation domain |Telomeric repeat binding factor (TRF) dimerisation domain |Telomeric repeat binding factor (TRF) dimerisation domain |TRF2 |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.118, a.102, c.107, d.42, a.24, a.146, d.379, f.56, a.246