Tableau information
Concept source: d3orca_ amino acid (a.a.) range (THR6)(ASP57)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR6) (GLY15) H1
(GLY15) (GLY24) H2
(TYR26) (GLY37) H3
(LYS39) (ASN45) E4
(SER49) (ASP57) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 117.6° H2
H3 -128.7° 111.1° H3
E4 60.7° 70.8° -127.2° E4
E5 -146.2° -90.2° 41.6° 152.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1d1la_ : (THR6) (GLU54) [view usage] : a.35.1.2 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |Phage repressors |cro lambda repressor |Bacteriophage lambda [TaxId: 10710]
d5croa_ : (THR6) (GLU54) [view usage] : a.35.1.2 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |Phage repressors |cro lambda repressor |Bacteriophage lambda [TaxId: 10710]
d2cw1a1 : (LEU7) (THR55) [view usage] : k.46.1.1 |Cro lambda fold design |Cro lambda fold design |Cro lambda fold design |Sn4m |Synthetic
d3orca_ : (THR6) (ASP57) [view usage] : a.35.1.2 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |Phage repressors |cro lambda repressor |Bacteriophage lambda [TaxId: 10710]
d2orca_ : (LYS8) (ASP56) [view usage] : a.35.1.2 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |Phage repressors |cro lambda repressor |Bacteriophage lambda [TaxId: 10710]
d2pijb_ : (PRO5) (ILE58) [view usage] : a.35.1.0 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 220664]
d1copd_ : (THR6) (PRO57) [view usage] : a.35.1.2 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |Phage repressors |cro lambda repressor |Bacteriophage lambda [TaxId: 10710]
d5croo_ : (LYS8) (GLU54) [view usage] : a.35.1.2 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |Phage repressors |cro lambda repressor |Bacteriophage lambda [TaxId: 10710]
d6croa_ : (LEU7) (PRO57) [view usage] : a.35.1.2 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |Phage repressors |cro lambda repressor |Bacteriophage lambda [TaxId: 10710]
d2ovga_ : (THR6) (PRO57) [view usage] : a.35.1.2 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |Phage repressors |cro lambda repressor |Bacteriophage lambda [TaxId: 10710]
d2ecsa_ : (THR6) (PRO57) [view usage] : a.35.1.2 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |Phage repressors |cro lambda repressor |Bacteriophage lambda [TaxId: 10710]
d1ixcb1 : (PHE3) (THR58) [view usage] : a.4.5.37 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |LysR-like transcriptional regulators |LysR-type regulatory protein CbnR |Ralstonia eutropha [TaxId: 106590]
d1orca_ : (THR6) (LYS56) [view usage] : a.35.1.2 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |Phage repressors |cro lambda repressor |Bacteriophage lambda [TaxId: 10710]
d1d1ma_ : (THR6) (VAL55) [view usage] : a.35.1.2 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |Phage repressors |cro lambda repressor |Bacteriophage lambda [TaxId: 10710]
d2a63a_ : (THR6) (ASP58) [view usage] : a.35.1.2 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |Phage repressors |cro lambda repressor |Bacteriophage lambda [TaxId: 10710]
d2pija_ : (PRO5) (PRO59) [view usage] : a.35.1.0 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 220664]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.4, a.35, k.46