Tableau information
Concept source: d3m4va_ amino acid (a.a.) range (PRO386)(LYS449)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO386) (LYS391) H1
(LYS391) (GLY394) H2
(GLY402) (LYS419) H3
(ASP422) (THR427) E4
(GLY443) (LYS449) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -42.4° H2
H3 72.0° 111.3° H3
E4 65.7° 47.2° 95.7° E4
E5 -95.5° -135.5° 45.3° 141.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3puzg_ : (GLN9) (PRO77) [view usage] : f.58.1.1 |MetI-like |MetI-like |MetI-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1g8ja2 : (CYS91) (THR135) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Arsenite oxidase large subunit |Alcaligenes faecalis [TaxId: 511]
d4apya_ : (ASN341) (THR409) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 1772]
d4bzsb_ : (ASP85) (LEU139) [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2wm4a_ : (ASP349) (SER428) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d3npla_ : (ASN381) (LYS449) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
d4hgib_ : (PRO386) (LYS449) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
d4duba_ : (PRO386) (LYS449) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
d3kx3b_ : (ARG375) (LYS449) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
d4wg2c_ : (ARG375) (LYS449) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
d4a17m_ : (THR9) (LEU69) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, cytoplasmic (60S subunit) |Tetrahymena thermophila [TaxId: 5911]
d2x24b1 : (GLN28) (ASN85) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Cow (Bos taurus) [TaxId: 9913]
d3u5ey_ : (ARG12) (LYS69) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
d2ij3a_ : (PRO386) (LYS449) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
d2pbla1 : (LEU3) (HIS69) [view usage] : c.69.1.2 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase |Uncharacterized protein TM1040_2492 |Silicibacter sp. tm1040 [TaxId: 292414]
d1bvya_ : (ASN381) (LYS449) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
d1g8jc2 : (CYS91) (TRP136) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Arsenite oxidase large subunit |Alcaligenes faecalis [TaxId: 511]
d4hgjb_ : (PRO386) (LYS449) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
d1ewfa1 : (GLY152) (GLY208) [view usage] : d.83.1.1 |Aha1/BPI domain-like |Bactericidal permeability-increasing protein, BPI |Bactericidal permeability-increasing protein, BPI |Bactericidal permeability-increasing protein, BPI |Human (Homo sapiens) [TaxId: 9606]
d1zo4b_ : (PRO386) (LYS449) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
d1m63a_ : (ARG16) (GLY93) [view usage] : d.159.1.3 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Protein serine/threonine phosphatase |Protein phosphatase-2B (PP-2B, calcineurin A subunit) |Human (Homo sapiens) [TaxId: 9606]
d2hpda_ : (ASN381) (LYS449) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
d3kx4a_ : (ASN381) (LYS449) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.69, c.81, a.104, d.159, i.1, d.92, c.14, f.58, d.83