Tableau information
Concept source: d3nela2 amino acid (a.a.) range (HIS372)(LEU428)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(HIS372) (GLY383) H1
(GLU390) (TYR398) H2
(HIS403) (GLY409) E3
(GLY409) (ASP419) H4
(ILE423) (LEU428) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 154.1° H2
E3 -42.1° 143.2° E3
H4 78.6° -86.7° 62.0° H4
H5 -119.6° 86.1° -92.2° 118.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1yova_ : (GLY337) (ASP417) [view usage] : c.111.1.2 |Activating enzymes of the ubiquitin-like proteins |Activating enzymes of the ubiquitin-like proteins |Ubiquitin activating enzymes (UBA) |Amyloid beta precursor protein-binding protein 1, APPBP1 |Human (Homo sapiens) [TaxId: 9606]
d3ieia_ : (GLY254) (GLU300) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3uwpa_ : (PRO49) (SER140) [view usage] : c.66.1.31 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Catalytic, N-terminal domain of histone methyltransferase Dot1l |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2vk9a1 : (LEU249) (LYS323) [view usage] : c.68.1.22 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |Glycosylating toxin catalytic domain-like |Alpha-toxin |Clostridium novyi [TaxId: 1542]
d1x54a2 : (TYR368) (LEU424) [view usage] : d.104.1.0 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 53953]
d1asya2 : (ASP488) (PRO557) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |Aspartyl-tRNA synthetase (AspRS) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1iu4a_ : (THR53) (GLU115) [view usage] : d.3.1.8 |Cysteine proteinases |Cysteine proteinases |Microbial transglutaminase |Microbial transglutaminase |Streptoverticillium mobaraense [TaxId: 35621]
d1btja_ : (PRO140) (PHE186) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Human (Homo sapiens) [TaxId: 9606]
d2vkdb_ : (GLU249) (GLU325) [view usage] : c.68.1.22 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |Glycosylating toxin catalytic domain-like |automated matches |Clostridium sordellii [TaxId: 1505]
d1b8aa2 : (HIS372) (LEU428) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |Aspartyl-tRNA synthetase (AspRS) |Pyrococcus kodakaraensis [TaxId: 311400]
d1bp5c_ : (PRO140) (PHE186) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Human (Homo sapiens) [TaxId: 9606]
d2qjia_ : (GLU2) (ILE47) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]
d1e1ta2 : (ASP431) (PRO498) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |Lysyl-tRNA synthetase (LysRS) |Escherichia coli, gene lysU [TaxId: 562]
d3srza_ : (GLN256) (LYS324) [view usage] : c.68.1.0 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d1yovc_ : (ASP335) (ASP417) [view usage] : c.111.1.2 |Activating enzymes of the ubiquitin-like proteins |Activating enzymes of the ubiquitin-like proteins |Ubiquitin activating enzymes (UBA) |Amyloid beta precursor protein-binding protein 1, APPBP1 |Human (Homo sapiens) [TaxId: 9606]
d3nela2 : (HIS372) (LEU428) [view usage] : d.104.1.0 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |automated matches |automated matches |Thermococcus kodakarensis [TaxId: 311400]
d2vkdc_ : (GLU249) (GLU325) [view usage] : c.68.1.22 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |Glycosylating toxin catalytic domain-like |Cytotoxin L |Clostridium sordellii [TaxId: 1505]
d2c7ta_ : (ASP16) (GLY78) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Bacillus circulans [TaxId: 1397]
d2qtva4 : (GLY677) (SER765) [view usage] : d.109.2.1 |Gelsolin-like |C-terminal, gelsolin-like domain of Sec23/24 |C-terminal, gelsolin-like domain of Sec23/24 |Sec23 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1xk6a1 : (TYR288) (ARG337) [view usage] : c.123.1.1 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB |Escherichia coli [TaxId: 562]
d2vkda1 : (ASP248) (GLU325) [view usage] : c.68.1.22 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |Glycosylating toxin catalytic domain-like |Cytotoxin L |Clostridium sordellii [TaxId: 1505]
d3i9v11 : (ALA179) (GLN240) [view usage] : c.142.1.1 |Nqo1 FMN-binding domain-like |Nqo1 FMN-binding domain-like |Nqo1 FMN-binding domain-like |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.123, c.67, c.94, c.68, c.66, d.104, d.3, c.111, d.109, c.142