Protein Concepts Dictionary

Tableau information

Concept source:  d3b3db_  amino acid (a.a.) range (PRO205)(ALA264)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (PRO205)  (TYR214) H1
	  (VAL218)  (GLY230) H2
	  (ILE232)  (SER237) E3
	  (LYS239)  (SER248) H4
	  (THR255)  (ALA264) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
H2       87.6°   H2                          
E3      -98.5°  160.5°   E3                   
H4       73.1°  -43.6°  155.8°   H4            
H5     -159.8° -102.9°   66.2° -126.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.8°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2c91b_ :   (HIS236)  (VAL318)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1pyfa_ :   (PRO250)  (ALA310)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Putative oxidoreductase IolS |Bacillus subtilis [TaxId: 1423]
 d4r9oc_ :   (GLN224)  (LEU293)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |automated matches |Salmonella enterica [TaxId: 99287]
 d4pmja_ :   (ALA207)  (PRO270)   [view usage] : c.1.7.0 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |automated matches |automated matches |Rhizobium meliloti [TaxId: 266834]
 d4r9oa_ :   (TYR223)  (LEU293)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |automated matches |Salmonella enterica [TaxId: 99287]
 d3wcza_ :   (ASP227)  (GLN287)   [view usage] : c.1.7.0 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |automated matches |automated matches |Silkworm (Bombyx mori) [TaxId: 7091]
 d1lqaa_ :   (GLY267)  (THR342)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Tas protein |Escherichia coli [TaxId: 562]
 d4wgha_ :   (SER210)  (TYR272)   [view usage] : c.1.7.0 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
 d1rala_ :   (VAL240)  (LEU299)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |3-alpha-hydroxysteroid dehydrogenase |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1og6a_ :   (GLN224)  (LEU293)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Hypothetical oxidoreductase YdhF |Escherichia coli [TaxId: 562]
 d1qwka_ :   (ASP231)  (GLU290)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Hypothetical protein C07D8.6 |Nematode (Caenorhabditis elegans) [TaxId: 6239]
 d1ur3m_ :   (PHE223)  (LEU293)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Hypothetical oxidoreductase YdhF |Escherichia coli [TaxId: 562]
 d1k8cb_ :   (HIS242)  (ALA301)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Xylose reductase |Fungus (Candida tenuis) [TaxId: 45596]
 d4jq2b_ :   (ASP238)  (GLY298)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |3-alpha-hydroxysteroid dehydrogenase |Human (Homo sapiens), type III [TaxId: 9606]
 d4jqab_ :   (ASP238)  (GLY298)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |3-alpha-hydroxysteroid dehydrogenase |Human (Homo sapiens), type III [TaxId: 9606]
 d1xjbb_ :   (ASP238)  (GLY298)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |3-alpha-hydroxysteroid dehydrogenase |Human (Homo sapiens), type III [TaxId: 9606]
 d2p5na_ :   (PRO239)  (LEU299)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d3n2ta_ :   (LYS240)  (HIS316)   [view usage] : c.1.7.0 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |automated matches |automated matches |Gluconobacter oxydans [TaxId: 442]
 d2he5a_ :   (GLU238)  (GLY298)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1r38a_ :   (HIS242)  (ILE305)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Xylose reductase |Fungus (Candida tenuis) [TaxId: 45596]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1