Tableau information
Concept source: d3etda2 amino acid (a.a.) range (ALA214)(SER276)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA214) (GLU229) H1
(MET233) (GLY237) H2
(LYS245) (GLY251) E3
(GLY253) (GLY267) H4
(GLY267) (SER276) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -66.9° H2
E3 146.2° 105.3° E3
H4 -46.5° -78.7° -167.2° H4
E5 128.9° 84.2° -22.6° -162.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2c7fa2 : (SER133) (SER213) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Alpha-L-arabinofuranosidase, catalytic domain |Clostridium thermocellum [TaxId: 1515]
d1lzka_ : (GLY128) (ILE188) [view usage] : c.69.1.2 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase |Heroin esterase |Rhodococcus sp. [TaxId: 1831]
d1g8ka2 : (LEU244) (GLU302) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Arsenite oxidase large subunit |Alcaligenes faecalis [TaxId: 511]
d3etea2 : (ALA214) (SER276) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |automated matches |Cow (Bos taurus) [TaxId: 9913]
d1g8ja2 : (LEU244) (GLU302) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Arsenite oxidase large subunit |Alcaligenes faecalis [TaxId: 511]
d3l0gd1 : (GLU7) (LYS69) [view usage] : d.41.2.0 |alpha/beta-Hammerhead |Nicotinate/Quinolinate PRTase N-terminal domain-like |automated matches |automated matches |Ehrlichia chaffeensis [TaxId: 205920]
d3kt3c_ : (ALA227) (ARG284) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Tryptophanyl-tRNA synthetase (TrpRS) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3nrra1 : (THR35) (LEU88) [view usage] : c.71.1.0 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |automated matches |automated matches |Babesia bovis [TaxId: 5865]
d4m76b_ : (THR211) (GLY272) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3etda2 : (ALA214) (SER276) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |automated matches |Cow (Bos taurus) [TaxId: 9913]
d1jjia_ : (PRO127) (TYR188) [view usage] : c.69.1.2 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase |Carboxylesterase |Archaeoglobus fulgidus [TaxId: 2234]
d3mvqa2 : (ALA214) (SER276) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Glutamate dehydrogenase |Cow (Bos taurus) [TaxId: 9913]
d3kt6b_ : (ALA227) (ARG284) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Tryptophanyl-tRNA synthetase (TrpRS) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1lzla_ : (GLY128) (ILE188) [view usage] : c.69.1.2 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase |Heroin esterase |Rhodococcus sp. [TaxId: 1831]
d3l0gc1 : (SER6) (LYS69) [view usage] : d.41.2.0 |alpha/beta-Hammerhead |Nicotinate/Quinolinate PRTase N-terminal domain-like |automated matches |automated matches |Ehrlichia chaffeensis [TaxId: 205920]
d1nr1a1 : (ALA218) (SER280) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Glutamate dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
d3kt3b_ : (ALA227) (ARG284) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Tryptophanyl-tRNA synthetase (TrpRS) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3mbfa_ : (LEU122) (GLU181) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
d3zwqa_ : (PRO124) (TYR185) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Pyrobaculum calidifontis [TaxId: 410359]
d2x1la1 : (TRP230) (ASN297) [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d1yj5a1 : (GLY263) (PRO323) [view usage] : c.108.1.9 |HAD-like |HAD-like |phosphatase domain of polynucleotide kinase |5' polynucleotide kinase-3' phosphatase, middle domain |Mouse (Mus musculus) [TaxId: 10090]
d1g8jc2 : (LEU244) (GLU302) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Arsenite oxidase large subunit |Alcaligenes faecalis [TaxId: 511]
d2cb0a_ : (PRO64) (SER110) [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Pyrococcus furiosus [TaxId: 2261]
d1ltqa1 : (LYS253) (ALA297) [view usage] : c.108.1.9 |HAD-like |HAD-like |phosphatase domain of polynucleotide kinase |Polynucleotide kinase, phosphatase domain |Bacteriophage T4 [TaxId: 10665]
d2p9ca1 : (ARG110) (ASP181) [view usage] : c.2.1.4 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Formate/glycerate dehydrogenases, NAD-domain |Phosphoglycerate dehydrogenase |Escherichia coli [TaxId: 562]
d3mvqf2 : (ALA214) (SER276) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Glutamate dehydrogenase |Cow (Bos taurus) [TaxId: 9913]
d1woya2 : (VAL226) (GLY288) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |automated matches |Thermus thermophilus [TaxId: 274]
d1l1fa1 : (ALA218) (SER280) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Glutamate dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
d1hwya1 : (ALA214) (SER276) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Glutamate dehydrogenase |Cow (Bos taurus) [TaxId: 9913]
d2c7bb_ : (THR122) (TYR182) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Uncultured archaeon [TaxId: 115547]
d2c7ba_ : (THR122) (TYR182) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Uncultured archaeon [TaxId: 115547]
d1c47a3 : (ASN304) (GLU353) [view usage] : c.84.1.1 |Phosphoglucomutase, first 3 domains |Phosphoglucomutase, first 3 domains |Phosphoglucomutase, first 3 domains |Phosphoglucomutase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.69, c.81, c.2, c.108, c.26, c.80, c.62, c.71, d.41, c.84