Protein Concepts Dictionary

Tableau information

Concept source:  d1tl9a_  amino acid (a.a.) range (SER308)(ASN352)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER308)  (VAL317) H1
	  (PRO319)  (LEU325) H2
	  (PHE334)  (SER337) E3
	  (SER337)  (ARG343) H4
	  (THR346)  (ASN352) E5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
H2      154.4°   H2                          
E3       37.6°  138.6°   E3                   
H4      148.5°  -39.2° -111.2°   H4            
E5      -76.6°   78.7°  -92.8° -108.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1zcma1 :   (SER308)  (LEU353)   [view usage] : d.3.1.3 |Cysteine proteinases |Cysteine proteinases |Calpain large subunit, catalytic domain (domain II) |Calpain large subunit, catalytic domain (domain II) |Human (Homo sapiens), mu type [TaxId: 9606]
 d2g8ea_ :   (SER308)  (ASN352)   [view usage] : d.3.1.3 |Cysteine proteinases |Cysteine proteinases |Calpain large subunit, catalytic domain (domain II) |Calpain large subunit, catalytic domain (domain II) |Norway rat (Rattus norvegicus), mu-type [TaxId: 10116]
 d1kxrb_ :   (SER308)  (LEU353)   [view usage] : d.3.1.3 |Cysteine proteinases |Cysteine proteinases |Calpain large subunit, catalytic domain (domain II) |Calpain large subunit, catalytic domain (domain II) |Norway rat (Rattus norvegicus), mu-type [TaxId: 10116]
 d2arya1 :   (SER312)  (THR354)   [view usage] : d.3.1.3 |Cysteine proteinases |Cysteine proteinases |Calpain large subunit, catalytic domain (domain II) |Calpain large subunit, catalytic domain (domain II) |Human (Homo sapiens), mu type [TaxId: 9606]
 d1kxra_ :   (SER308)  (CYS351)   [view usage] : d.3.1.3 |Cysteine proteinases |Cysteine proteinases |Calpain large subunit, catalytic domain (domain II) |Calpain large subunit, catalytic domain (domain II) |Norway rat (Rattus norvegicus), mu-type [TaxId: 10116]
 d1kful3 :   (PRO302)  (CYS341)   [view usage] : d.3.1.3 |Cysteine proteinases |Cysteine proteinases |Calpain large subunit, catalytic domain (domain II) |Calpain large subunit, catalytic domain (domain II) |Human (Homo sapiens), M-type [TaxId: 9606]
 d1tloa_ :   (SER308)  (THR354)   [view usage] : d.3.1.3 |Cysteine proteinases |Cysteine proteinases |Calpain large subunit, catalytic domain (domain II) |Calpain large subunit, catalytic domain (domain II) |Norway rat (Rattus norvegicus), mu-type [TaxId: 10116]
 d1tl9a_ :   (SER308)  (ASN352)   [view usage] : d.3.1.3 |Cysteine proteinases |Cysteine proteinases |Calpain large subunit, catalytic domain (domain II) |Calpain large subunit, catalytic domain (domain II) |Norway rat (Rattus norvegicus), mu-type [TaxId: 10116]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   d.3