Protein Concepts Dictionary

Tableau information

Concept source:  d2rd5b_  amino acid (a.a.) range (ASP235)(GLY297)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP235)  (GLY246) H1
	  (MET252)  (GLY266) H2
	  (LYS268)  (ASP274) E3
	  (HIS279)  (ILE285) H4
	  (GLY292)  (GLY297) E5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
H2     -151.8°   H2                          
E3       47.2°  160.7°   E3                   
H4      134.1°  -36.5°  144.1°   H4            
E5     -109.2°  -43.2°  156.1°  -45.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4f6ta_ :   (ALA216)  (GLY272)   [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Azotobacter vinelandii [TaxId: 354]
 d2rd5a_ :   (ASP235)  (GLY297)   [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d1b7ba_ :   (THR250)  (THR306)   [view usage] : c.73.1.1 |Carbamate kinase-like |Carbamate kinase-like |Carbamate kinase |Carbamate kinase |Enterococcus faecium [TaxId: 1352]
 d4jz7c_ :   (LYS257)  (ASP316)   [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Giardia lamblia [TaxId: 184922]
 d4ndoa_ :   (ALA216)  (GLY272)   [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Azotobacter vinelandii [TaxId: 322710]
 d2ogxa_ :   (ALA216)  (GLY272)   [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Azotobacter vinelandii [TaxId: 354]
 d2va1e_ :   (ASN184)  (LYS235)   [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Ureaplasma parvum [TaxId: 134821]
 d1e19a_ :   (LYS256)  (PRO314)   [view usage] : c.73.1.1 |Carbamate kinase-like |Carbamate kinase-like |Carbamate kinase |Carbamate kinase |Pyrococcus furiosus [TaxId: 2261]
 d2v5ha_ :   (ILE229)  (GLY290)   [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Synechococcus elongatus [TaxId: 1140]
 d2ap9a1 :   (LEU242)  (ARG295)   [view usage] : c.73.1.2 |Carbamate kinase-like |Carbamate kinase-like |N-acetyl-l-glutamate kinase |N-acetyl-l-glutamate kinase |Mycobacterium tuberculosis [TaxId: 1773]
 d2we4a_ :   (VAL251)  (LYS310)   [view usage] : c.73.1.1 |Carbamate kinase-like |Carbamate kinase-like |Carbamate kinase |Carbamate kinase |Enterococcus faecalis [TaxId: 1351]
 d2p8ia_ :    (THR64)  (ILE104)   [view usage] : d.58.55.1 |Ferredoxin-like |DOPA-like |DOPA dioxygenase-like |Putative dioxygenase BxeB0224 |Burkholderia xenovorans [TaxId: 36873]
 d2rd5b_ :   (ASP235)  (GLY297)   [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d2p8ic_ :    (THR64)  (ILE104)   [view usage] : d.58.55.1 |Ferredoxin-like |DOPA-like |DOPA dioxygenase-like |Putative dioxygenase BxeB0224 |Burkholderia xenovorans [TaxId: 36873]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.58,    c.73