Tableau information
Concept source: d3lnof_ amino acid (a.a.) range (SER2)(PRO73)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER2) (LEU14) H1
(ASP25) (GLY30) H2
(TYR33) (GLU39) E3
(ASN42) (MSE47) E4
(ALA57) (PRO73) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -106.4° H2
E3 135.5° -117.9° E3
E4 -48.4° 58.1° 175.6° E4
H5 125.8° -113.3° -37.8° 144.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3lnof_ : (SER2) (PRO73) [view usage] : d.52.8.0 |Alpha-lytic protease prodomain-like |Fe-S cluster assembly (FSCA) domain-like |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d3cq2b_ : (PRO6) (SER69) [view usage] : d.52.8.2 |Alpha-lytic protease prodomain-like |Fe-S cluster assembly (FSCA) domain-like |PaaD-like |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d2qfib1 : (ASP212) (ILE271) [view usage] : d.52.9.1 |Alpha-lytic protease prodomain-like |Cation efflux protein cytoplasmic domain-like |Cation efflux protein cytoplasmic domain-like |Ferrous-iron efflux pump FieF (YiiP) |Escherichia coli [TaxId: 562]
d1hh2p2 : (GLU202) (ILE251) [view usage] : d.52.3.1 |Alpha-lytic protease prodomain-like |Prokaryotic type KH domain (KH-domain type II) |Prokaryotic type KH domain (KH-domain type II) |Transcription factor NusA, C-terminal domains |Thermotoga maritima [TaxId: 2336]
d1n1ha_ : (SER684) (GLY768) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Reovirus polymerase lambda3 |Reovirus [TaxId: 10891]
d3lnod_ : (ALA0) (PRO73) [view usage] : d.52.8.0 |Alpha-lytic protease prodomain-like |Fe-S cluster assembly (FSCA) domain-like |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d3cq2a_ : (LEU7) (ARG70) [view usage] : d.52.8.2 |Alpha-lytic protease prodomain-like |Fe-S cluster assembly (FSCA) domain-like |PaaD-like |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d1k0ra2 : (ASN187) (ILE236) [view usage] : d.52.3.1 |Alpha-lytic protease prodomain-like |Prokaryotic type KH domain (KH-domain type II) |Prokaryotic type KH domain (KH-domain type II) |Transcription factor NusA, C-terminal domains |Mycobacterium tuberculosis [TaxId: 1773]
d3lz7d_ : (THR8) (CYS73) [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |Hypothetical protein HI1161 |Haemophilus influenzae [TaxId: 727]
d1uwda_ : (LYS8) (LYS71) [view usage] : d.52.8.2 |Alpha-lytic protease prodomain-like |Fe-S cluster assembly (FSCA) domain-like |PaaD-like |Hypothetical protein TM0487 |Thermotoga maritima [TaxId: 2336]
d3lnoa_ : (ASN-1) (PRO73) [view usage] : d.52.8.0 |Alpha-lytic protease prodomain-like |Fe-S cluster assembly (FSCA) domain-like |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d3lnob_ : (ASN-1) (LYS66) [view usage] : d.52.8.0 |Alpha-lytic protease prodomain-like |Fe-S cluster assembly (FSCA) domain-like |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d3lz7a_ : (THR8) (CYS73) [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |Hypothetical protein HI1161 |Haemophilus influenzae [TaxId: 727]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, d.38, d.52