Tableau information
Concept source: d1hr6h1 amino acid (a.a.) range (THR68)(THR131)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR68) (GLY79) H1
(PRO84) (GLY96) H2
(GLY96) (ARG105) E3
(THR108) (SER114) E4
(ILE119) (THR131) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 73.6° H2
E3 164.0° 121.9° E3
E4 -32.2° 42.2° 163.7° E4
H5 126.1° -159.1° -39.4° 155.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2fgea4 : (GLY74) (PHE141) [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Presequence protease 1, PREP1 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d3h1ho1 : (ARG70) (ALA129) [view usage] : d.185.1.0 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d1ppja1 : (GLY54) (GLN118) [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Cytochrome bc1 core subunit 1 |Cow (Bos taurus) [TaxId: 9913]
d2d27a1 : (LEU80) (GLY127) [view usage] : d.52.10.1 |Alpha-lytic protease prodomain-like |EspE N-terminal domain-like |GSPII protein E N-terminal domain-like |Type II secretion ATPase XpsE |Xanthomonas campestris [TaxId: 339]
d1rtda2 : (TRP153) (GLY213) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
d1q2la4 : (GLY85) (ALA150) [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Protease III |Escherichia coli [TaxId: 562]
d4puoa1 : (TRP153) (GLY213) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |automated matches |Human immunodeficiency virus type 1 bh10 [TaxId: 11678]
d1ezvb1 : (GLY46) (LEU109) [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Cytochrome bc1 core subunit 2 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2fgea2 : (SER830) (GLY893) [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Presequence protease 1, PREP1 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d3hdua_ : (SER5) (SER86) [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Syntrophus aciditrophicus [TaxId: 56780]
d2a2la1 : (CYS61) (LEU145) [view usage] : d.110.9.1 |Profilin-like |GlcG-like |GlcG-like |DhaI homolog |Klebsiella pneumoniae [TaxId: 573]
d3h1hn1 : (GLY54) (CYS120) [view usage] : d.185.1.0 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d3h1hb1 : (ARG70) (ALA129) [view usage] : d.185.1.0 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d1vh5a_ : (THR8) (THR74) [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |Hypothetical protein YdiI |Escherichia coli [TaxId: 562]
d1s9gb_ : (MET164) (GLY213) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
d1l0lb1 : (ARG70) (ALA129) [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Cytochrome bc1 core subunit 2 |Cow (Bos taurus) [TaxId: 9913]
d1vi8b_ : (THR8) (THR74) [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |Hypothetical protein YdiI |Escherichia coli [TaxId: 562]
d3ljta_ : (ALA334) (SER393) [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2fgea1 : (VAL594) (VAL669) [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Presequence protease 1, PREP1 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d3hduc_ : (ASN7) (MSE85) [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Syntrophus aciditrophicus [TaxId: 56780]
d3hdub_ : (GLU9) (MSE85) [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Syntrophus aciditrophicus [TaxId: 56780]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, d.92, d.185, d.110, d.38, d.52