Protein Concepts Dictionary

Tableau information

Concept source:  d3pnsh_  amino acid (a.a.) range (SER187)(LEU257)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER187)  (GLY195) H1
	  (GLU202)  (SER213) H2
	  (LYS216)  (GLY222) E3
	  (ILE224)  (THR228) E4
	  (HIS235)  (LEU257) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
H2       58.1°   H2                          
E3     -103.6° -161.1°   E3                   
E4      -96.2° -111.7°  -72.3°   E4            
H5       55.7°   -3.1°  158.2°  113.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1t0ub_ :   (VAL177)  (LEU252)   [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Uridine phosphorylase |Escherichia coli [TaxId: 562]
 d4iawa_ :    (PRO12)   (MET51)   [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Neutrophil gelatinase-associated lipocalin (NGAL) |Human (Homo sapiens) [TaxId: 9606]
 d4r31c_ :   (TYR175)  (GLY254)   [view usage] : c.56.2.0 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |automated matches |automated matches |Actinobacillus succinogenes [TaxId: 339671]
 d3pnsk_ :   (SER187)  (LEU257)   [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |automated matches |Vibrio cholerae [TaxId: 243277]
 d1jdsc_ :   (GLU166)  (THR235)   [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |5'-deoxy-5'-methylthioadenosine phosphorylase |Sulfolobus solfataricus [TaxId: 2287]
 d4iaxa_ :    (PRO12)   (LEU51)   [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Neutrophil gelatinase-associated lipocalin (NGAL) |Human (Homo sapiens) [TaxId: 9606]
 d4i2va_ :   (GLY182)  (LEU253)   [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Uridine phosphorylase |Yersinia pseudotuberculosis [TaxId: 633]
 d4iawb_ :    (PRO12)   (MET51)   [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Neutrophil gelatinase-associated lipocalin (NGAL) |Human (Homo sapiens) [TaxId: 9606]
 d4r31b_ :   (TYR175)  (GLY254)   [view usage] : c.56.2.0 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |automated matches |automated matches |Actinobacillus succinogenes [TaxId: 339671]
 d1lx7a_ :   (VAL177)  (LEU253)   [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Uridine phosphorylase |Escherichia coli [TaxId: 562]
 d1ryza_ :   (SER183)  (ARG251)   [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Uridine phosphorylase |Salmonella typhimurium [TaxId: 90371]
 d3pnsa_ :   (SER187)  (LEU257)   [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |automated matches |Vibrio cholerae [TaxId: 243277]
 d4r31a_ :   (TYR175)  (ARG255)   [view usage] : c.56.2.0 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |automated matches |automated matches |Actinobacillus succinogenes [TaxId: 339671]
 d3o6vb_ :   (SER187)  (LEU257)   [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |automated matches |Vibrio cholerae [TaxId: 243277]
 d4r31d_ :   (TYR175)  (GLY254)   [view usage] : c.56.2.0 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |automated matches |automated matches |Actinobacillus succinogenes [TaxId: 339671]
 d3pnsh_ :   (SER187)  (LEU257)   [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |automated matches |Vibrio cholerae [TaxId: 243277]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.56,    b.60