Tableau information
Concept source: d1d8db_ amino acid (a.a.) range (HIS331)(PRO419)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(HIS331) (CYS343) H1
(PHE360) (GLN374) H2
(GLN374) (SER378) E3
(MET381) (MET387) E4
(GLY404) (PRO419) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -150.0° H2
E3 147.0° -56.4° E3
E4 -37.6° 124.7° 169.0° E4
H5 101.6° -99.5° -45.5° 135.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3dpyb1 : (HIS331) (PRO419) [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Protein farnesyltransferase, beta-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1ft2b_ : (HIS331) (PRO419) [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Protein farnesyltransferase, beta-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1n94b_ : (GLN332) (LYS418) [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Protein farnesyltransferase, beta-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1n95b_ : (HIS331) (PRO419) [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Protein farnesyltransferase, beta-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1d8db_ : (HIS331) (PRO419) [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Protein farnesyltransferase, beta-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1jb0d_ : (GLU62) (LYS129) [view usage] : d.187.1.1 |Photosystem I subunit PsaD |Photosystem I subunit PsaD |Photosystem I subunit PsaD |Photosystem I subunit PsaD |Synechococcus elongatus [TaxId: 32046]
d3o6oa_ : (TYR23) (VAL89) [view usage] : d.122.1.1 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |Heat shock protein 90, HSP90, N-terminal domain |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d1wxoa_ : (ILE4) (GLU68) [view usage] : d.67.1.2 |RRF/tRNA synthetase additional domain-like |ThrRS/AlaRS common domain |AlaX-like |Hypothetical protein PH0574 |Pyrococcus horikoshii [TaxId: 53953]
d1b3qb3 : (GLU401) (GLU465) [view usage] : d.122.1.3 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |Histidine kinase |Histidine kinase CheA |Thermotoga maritima [TaxId: 2336]
d1ld7b_ : (GLN833) (PRO919) [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Protein farnesyltransferase, beta-subunit |Human (Homo sapiens) [TaxId: 9606]
d1fppb_ : (HIS331) (PRO419) [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Protein farnesyltransferase, beta-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2zirb_ : (HIS331) (GLN417) [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Protein farnesyltransferase, beta-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4gtob_ : (HIS331) (PRO419) [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Protein farnesyltransferase, beta-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1ng5a_ : (THR107) (ASN151) [view usage] : b.100.1.1 |Sortase |Sortase |Sortase |Sortase B |Staphylococcus aureus [TaxId: 1280]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.102, d.122, d.67, d.187, b.100