Tableau information
Concept source: d2o9ba1 amino acid (a.a.) range (HIS138)(PRO204)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(HIS138) (ALA150) H1
(LEU153) (LEU167) H2
(ASP171) (PRO180) E3
(THR183) (ARG191) E4
(GLY200) (PRO204) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 158.2° H2
E3 -53.2° 143.1° E3
E4 114.3° -55.9° 156.5° E4
E5 -102.9° 86.1° -58.3° 141.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1nbwa3 : (ASN442) (GLU489) [view usage] : c.55.1.6 |Ribonuclease H-like motif |Actin-like ATPase domain |ATPase domain of dehydratase reactivase alpha subunit |ATPase domain of the glycerol dehydratase reactivase alpha subunit |Klebsiella pneumoniae [TaxId: 573]
d1mc0a1 : (TYR215) (PRO283) [view usage] : d.110.2.1 |Profilin-like |GAF domain-like |GAF domain |3',5'-cyclic nucleotide phosphodiesterase 2A, GAF A and GAF B domains |Mouse (Mus musculus) [TaxId: 10090]
d1n4ob_ : (ASP24) (CYS69) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Stenotrophomonas maltophilia, L2 [TaxId: 40324]
d1k0ra4 : (ALA6) (ASP73) [view usage] : d.202.1.1 |Transcription factor NusA, N-terminal domain |Transcription factor NusA, N-terminal domain |Transcription factor NusA, N-terminal domain |Transcription factor NusA, N-terminal domain |Mycobacterium tuberculosis [TaxId: 1773]
d3s7qa2 : (HIS138) (PRO204) [view usage] : d.110.2.1 |Profilin-like |GAF domain-like |GAF domain |Bacteriophytochrome BphP |Deinococcus radiodurans [TaxId: 1299]
d1nbwc3 : (GLY441) (GLU489) [view usage] : c.55.1.6 |Ribonuclease H-like motif |Actin-like ATPase domain |ATPase domain of dehydratase reactivase alpha subunit |ATPase domain of the glycerol dehydratase reactivase alpha subunit |Klebsiella pneumoniae [TaxId: 573]
d3uxoa3 : (TYR265) (GLU309) [view usage] : d.218.1.2 |Nucleotidyltransferase |Nucleotidyltransferase |DNA polymerase beta-like |DNA polymerase beta, catalytic (31 kD) fragment |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3zq5a2 : (PHE133) (PRO204) [view usage] : d.110.2.0 |Profilin-like |GAF domain-like |automated matches |automated matches |Synechocystis sp. [TaxId: 1148]
d1vhma_ : (ASN20) (VAL89) [view usage] : d.110.2.1 |Profilin-like |GAF domain-like |GAF domain |Hypothetical protein YebR |Escherichia coli [TaxId: 562]
d1ah6a_ : (ASP113) (LEU160) [view usage] : d.122.1.1 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |Heat shock protein 90, HSP90, N-terminal domain |HSP90 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3u5ip_ : (GLY9) (ALA65) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
d2z6pa_ : (MSE1) (ASP85) [view usage] : d.20.1.4 |UBC-like |UBC-like |UFC1-like |Ufm1-conjugating enzyme 1, UFC1 |Human (Homo sapiens) [TaxId: 9606]
d3g6oa2 : (SER119) (PRO191) [view usage] : d.110.2.0 |Profilin-like |GAF domain-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d2o34a1 : (ASP191) (VAL248) [view usage] : d.96.2.2 |T-fold |ApbE-like |DVU1097-like |Hypothetical protein DVU1097 |Desulfovibrio vulgaris [TaxId: 881]
d1m5ya2 : (ARG235) (GLY275) [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |Porin chaperone SurA, PPIase domains |Escherichia coli [TaxId: 562]
d4a17y_ : (GLY9) (ALA65) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, cytoplasmic (60S subunit) |Tetrahymena thermophila [TaxId: 5911]
d2oola1 : (THR142) (PRO213) [view usage] : d.110.2.1 |Profilin-like |GAF domain-like |GAF domain |Sensor protein PhyB2 |Rhodopseudomonas palustris [TaxId: 1076]
d2z6oa_ : (MET1) (ASP85) [view usage] : d.20.1.4 |UBC-like |UBC-like |UFC1-like |Ufm1-conjugating enzyme 1, UFC1 |Human (Homo sapiens) [TaxId: 9606]
d2o9ba1 : (HIS138) (PRO204) [view usage] : d.110.2.1 |Profilin-like |GAF domain-like |GAF domain |Bacteriophytochrome BphP |Deinococcus radiodurans [TaxId: 1299]
d3ibda_ : (HIS319) (PRO383) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2o9ca1 : (HIS138) (PRO204) [view usage] : d.110.2.1 |Profilin-like |GAF domain-like |GAF domain |Bacteriophytochrome BphP |Deinococcus radiodurans [TaxId: 1299]
d3ibra2 : (SER119) (PRO191) [view usage] : d.110.2.0 |Profilin-like |GAF domain-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d1sg9a_ : (SER59) (PRO104) [view usage] : c.66.1.30 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |N5-glutamine methyltransferase, HemK |N5-glutamine methyltransferase, HemK |Thermotoga maritima [TaxId: 2336]
d1n4oa_ : (THR23) (CYS69) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Stenotrophomonas maltophilia, L2 [TaxId: 40324]
d1v19a_ : (SER193) (VAL241) [view usage] : c.72.1.1 |Ribokinase-like |Ribokinase-like |Ribokinase-like |2-keto-3-deoxygluconate kinase |Thermus thermophilus [TaxId: 274]
d3j3bp_ : (GLY9) (ALA65) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Homo sapiens [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.3, a.104, i.1, c.66, c.72, d.122, c.55, d.96, d.20, d.110, d.218, d.26, d.202