Tableau information
Concept source: d2xr6a_ amino acid (a.a.) range (PRO337)(SER380)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO337) (TRP343) H1
(ASN344) (ASN350) H2
(ASP355) (PHE359) E3
(GLY363) (ASP366) E4
(PHE374) (SER380) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 105.2° H2
E3 69.5° 153.2° E3
E4 -110.2° -7.2° 159.1° E4
E5 147.2° -95.9° 80.3° -93.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2xr5a_ : (PRO337) (SER380) [view usage] : d.169.1.0 |C-type lectin-like |C-type lectin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3p7fc1 : (ASN273) (SER326) [view usage] : d.169.1.0 |C-type lectin-like |C-type lectin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1xpha_ : (PRO349) (PRO392) [view usage] : d.169.1.0 |C-type lectin-like |C-type lectin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4ffka2 : (ALA112) (ASN170) [view usage] : d.44.1.0 |Fe,Mn superoxide dismutase (SOD), C-terminal domain |Fe,Mn superoxide dismutase (SOD), C-terminal domain |automated matches |automated matches |Acidilobus saccharovorans [TaxId: 666510]
d4caja_ : (SER274) (SER318) [view usage] : d.169.1.0 |C-type lectin-like |C-type lectin-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1k9id_ : (PRO337) (SER380) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |DC-SIGN (dendritic cell-specific ICAM-3 grabbing nonintegrin) |Human (Homo sapiens) [TaxId: 9606]
d2cmza1 : (SER263) (ALA336) [view usage] : e.76.1.2 |Viral glycoprotein ectodomain-like |Viral glycoprotein ectodomain-like |Spike glycoprotein-like |Spike glycoprotein |Vesicular stomatitis indiana virus [TaxId: 11277]
d3kqge1 : (ASN273) (PRO322) [view usage] : d.169.1.0 |C-type lectin-like |C-type lectin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2xr6a_ : (PRO337) (SER380) [view usage] : d.169.1.0 |C-type lectin-like |C-type lectin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1tn3a_ : (GLU137) (VAL181) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Tetranectin |Human (Homo sapiens) [TaxId: 9606]
d2cmzb_ : (THR265) (ALA336) [view usage] : e.76.1.2 |Viral glycoprotein ectodomain-like |Viral glycoprotein ectodomain-like |Spike glycoprotein-like |automated matches |Vesicular stomatitis indiana virus [TaxId: 11277]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.169, d.44, e.76