Protein Concepts Dictionary

Tableau information

Concept source:  d2wtxa_  amino acid (a.a.) range (ALA390)(GLN452)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ALA390)  (THR395) H1
	  (ALA397)  (ASN401) E2
	  (ARG405)  (LEU416) H3
	  (SER419)  (ASN437) H4
	  (ASP438)  (GLN452) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
E2     -129.6°   E2                          
H3       43.3°  159.0°   H3                   
H4      126.5°  -91.4° -107.7°   H4            
H5      120.5°  -75.8°  125.2°   28.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3dzca_ :   (PRO315)  (LYS372)   [view usage] : c.87.1.3 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-N-acetylglucosamine 2-epimerase |automated matches |Vibrio cholerae [TaxId: 666]
 d2iv7a1 :   (HIS307)  (ILE368)   [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |Lipopolysaccharide core biosynthesis protein RfaG |Escherichia coli [TaxId: 562]
 d4fkza_ :   (PRO308)  (GLY368)   [view usage] : c.87.1.3 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-N-acetylglucosamine 2-epimerase |automated matches |Bacillus subtilis [TaxId: 224308]
 d1ixya_ :   (HIS290)  (ASP350)   [view usage] : c.87.1.1 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |beta-Glucosyltransferase (DNA-modifying) |beta-Glucosyltransferase (DNA-modifying) |Bacteriophage T4 [TaxId: 10665]
 d2bisb_ :   (GLY362)  (THR426)   [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |automated matches |Pyrococcus abyssi [TaxId: 29292]
 d1nlma_ :   (LEU294)  (ARG355)   [view usage] : c.87.1.2 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Peptidoglycan biosynthesis glycosyltransferase MurG |Peptidoglycan biosynthesis glycosyltransferase MurG |Escherichia coli [TaxId: 562]
 d1f6da_ :   (PRO314)  (LYS370)   [view usage] : c.87.1.3 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-N-acetylglucosamine 2-epimerase |UDP-N-acetylglucosamine 2-epimerase |Escherichia coli [TaxId: 562]
 d1nzda_ :   (HIS290)  (ASP350)   [view usage] : c.87.1.1 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |beta-Glucosyltransferase (DNA-modifying) |beta-Glucosyltransferase (DNA-modifying) |Bacteriophage T4 [TaxId: 10665]
 d2wtxa_ :   (ALA390)  (GLN452)   [view usage] : c.87.1.6 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Trehalose-6-phosphate synthase, OtsA |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1pn3a_ :   (ALA323)  (LYS391)   [view usage] : c.87.1.5 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Gtf glycosyltransferase |TDP-epi-vancosaminyltransferase GtfA |Amycolatopsis orientalis [TaxId: 31958]
 d2wtxd_ :   (ALA388)  (GLN452)   [view usage] : c.87.1.6 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Trehalose-6-phosphate synthase, OtsA |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d4fkzb_ :   (PRO308)  (GLY368)   [view usage] : c.87.1.3 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-N-acetylglucosamine 2-epimerase |automated matches |Bacillus subtilis [TaxId: 224308]
 d1f0ka_ :   (LEU294)  (ALA356)   [view usage] : c.87.1.2 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Peptidoglycan biosynthesis glycosyltransferase MurG |Peptidoglycan biosynthesis glycosyltransferase MurG |Escherichia coli [TaxId: 562]
 d1f6dd_ :   (PRO314)  (LYS370)   [view usage] : c.87.1.3 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-N-acetylglucosamine 2-epimerase |UDP-N-acetylglucosamine 2-epimerase |Escherichia coli [TaxId: 562]
 d2iw1a_ :   (HIS307)  (ILE368)   [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |Lipopolysaccharide core biosynthesis protein RfaG |Escherichia coli [TaxId: 562]
 d3beoa_ :   (PRO310)  (ASN370)   [view usage] : c.87.1.0 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
 d2bisa1 :   (GLY362)  (GLY427)   [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |Glycogen synthase 1, GlgA |Pyrococcus abyssi [TaxId: 29292]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.87